DRSC/TRiP Functional Genomics Resources

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Protein Alignment sel and AT1G42480

DIOPT Version :10

Sequence 1:NP_610547.1 Gene:sel / 36046 FlyBaseID:FBgn0263260 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_564481.1 Gene:AT1G42480 / 840852 AraportID:AT1G42480 Length:182 Species:Arabidopsis thaliana


Alignment Length:207 Identity:48/207 - (23%)
Similarity:90/207 - (43%) Gaps:54/207 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILFGLLALAQGYSFTSREVKCHVCKAVVTELEEAIAKEDPHKMADVSGFRLDAQGNSISKKVRL 70
            |:||..:.:|.....:|.:.||..|.||..|||..:.||.|....|:.. ||:::|....|.:..
plant     4 LVLFTAVIIAIFSHGSSVDDKCAACNAVAEELELQLLKEKPRNHLDMRN-RLNSKGQREGKVIDY 67

  Fly    71 VKSEMFLTELMEKICEKMDDYLKATYKSNGKFTLLKMIINGQMNPDSSLVDFVQDGDL----NK- 130
            ..|::.:.:|::.:|::|.||           ||.|      :.|.:.  .:|:.|:.    || 
plant    68 RISDLRVVDLLDGLCDRMQDY-----------TLQK------VEPKNR--QWVKVGNFDNLTNKQ 113

  Fly   131 -------SLGHFCNEVLEDNDEIFVKAFQAEELGNDL--------DIK--ICSEQASYC---DES 175
                   .:..:|..:||:.:         :|||..:        :::  :|...:::|   .|:
plant   114 EAKAHANDISTYCGRLLEETE---------DELGEVIKNGSLKAGEVRKVLCQTLSNHCRQSSET 169

  Fly   176 PVQEEYDFDGKE 187
            ..::|.|.|..|
plant   170 DSEDEEDDDADE 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
selNP_610547.1 DUF3456 26..172 CDD:463404 37/167 (22%)
AT1G42480NP_564481.1 DUF3456 24..163 CDD:463404 37/167 (22%)

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