DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1407 and PFA3

DIOPT Version :10

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_014073.1 Gene:PFA3 / 855390 SGDID:S000005270 Length:336 Species:Saccharomyces cerevisiae


Alignment Length:295 Identity:80/295 - (27%)
Similarity:135/295 - (45%) Gaps:51/295 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PVLFITAVIAWSYYAYVVELCIRNSENRIGMIFMLLFYHLFLTLFMWSYWRTIMTSVGRIPDQWR 88
            |....|.:..|:.|..:..:      ::|...|:.|.....|.:.:::|::.|....|...|   
Yeast    12 PRCLTTCLYIWTAYITLTRI------HQIPRWFLALTIVPTLAVALYTYYKVIARGPGSPLD--- 67

  Fly    89 IPDEEVSRLFRADSPDTQKRILNNFARDLP---VTNRTM----NGSVRFCEKCKIIKPDRAHHCS 146
            .||..|..|..|::           ..:||   ::.|.:    :|..|.|:.|.:.||||.||||
Yeast    68 FPDLLVHDLKAAEN-----------GLELPPEYMSKRCLTLKHDGRFRVCQVCHVWKPDRCHHCS 121

  Fly   147 VCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFLGYALVYCLYVAFTSLHDFVEFWKVGAYDNNGYS 211
            .|..|:|||||||||...|..|.|.|:|:.||.|..:|...|...:.::      :|.:.|:|..
Yeast   122 SCDVCILKMDHHCPWFAECTGFRNQKFFIQFLMYTTLYAFLVLIYTCYE------LGTWFNSGSF 180

  Fly   212 AQGQLNASGMGRFHILFLFFIAIMFAISLVSLFGYHIYLVLVNRTTLE-----SFRAPI------ 265
            .:..::      ||:|.:..:|:...||:::...:.||.|..|:||:|     .:|..:      
Yeast   181 NRELID------FHLLGVALLAVAVFISVLAFTCFSIYQVCKNQTTIEVHGMRRYRRDLEILNDS 239

  Fly   266 FRVGGPDKNGYNLG-RYANFCEVFGDDWQYWFLPV 299
            :......:|.::|| ..||:.::.|..|..|.||:
Yeast   240 YGTNEHLENIFDLGSSMANWQDIMGTSWLEWILPI 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 DHHC 129..259 CDD:396215 47/129 (36%)
PFA3NP_014073.1 COG5273 1..304 CDD:227598 80/295 (27%)

Return to query results.
Submit another query.