DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1407 and zdhhc3b

DIOPT Version :9

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001071225.1 Gene:zdhhc3b / 777709 ZFINID:ZDB-GENE-061110-19 Length:300 Species:Danio rerio


Alignment Length:328 Identity:84/328 - (25%)
Similarity:127/328 - (38%) Gaps:104/328 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CGFCMAVFKWIPVLFITAVIAWSYYAYVVELCIRNSENRIGMIFMLLFYHLFLT---LFMWSYWR 74
            ||...||..|:.||:...|:     .:|:.|..|:      :::..:...||.:   |.:.|:.|
Zfish    44 CGIVCAVITWLLVLYAEFVV-----VFVMLLPARS------LLYSFINGALFNSLAFLALASHLR 97

  Fly    75 TIMTSVGRIPDQWRIPDEEVSRLFRADSPDTQKRILNNFARDLPVTNRTMNGSVRF-CEKCKIIK 138
            .:.|..|.:|.                         .|..::...:.:...|.|.: |.||..||
Zfish    98 AMCTDPGAVPK-------------------------GNATKEFIESLQLKPGQVVYKCPKCCSIK 137

  Fly   139 PDRAHHCSVCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFLGYALVYCLYVAFTSLHDFVEFWKVG 203
            ||||||||||..|:.|||||||||||||...|.||||||       .:|:|..|||..:      
Zfish   138 PDRAHHCSVCKRCIKKMDHHCPWVNNCVGENNQKYFVLF-------TMYIALISLHALL------ 189

  Fly   204 AYDNNGYSAQGQLNASGMGRFHILFLF-----------------------FIAIMFAISLVSLFG 245
                             |..||.:|.|                       |.|::|.|....:||
Zfish   190 -----------------MVAFHFVFCFEEDWAKCSSFSPPATVILLILLCFEALLFLIFTAVMFG 237

  Fly   246 YHIYLVLVNRTTLESFRAPIFRVGGPDKNGYNLGRYANFCEVFGDDWQYWFLPVFSSRGDG---- 306
            ..::.:..:.|.:|..:.       .::......::.|...|||..:...::..|::...|    
Zfish   238 TQVHSICNDETGIEQLKK-------EERRWAKRSKWMNMKVVFGHPFSMSWMSPFATPDHGKANL 295

  Fly   307 YSY 309
            |.|
Zfish   296 YQY 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 zf-DHHC 129..259 CDD:279823 53/153 (35%)
zdhhc3bNP_001071225.1 zf-DHHC 130..256 CDD:279823 54/162 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.