DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1407 and zgc:77880

DIOPT Version :9

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_957185.1 Gene:zgc:77880 / 393865 ZFINID:ZDB-GENE-040426-1901 Length:297 Species:Danio rerio


Alignment Length:331 Identity:83/331 - (25%)
Similarity:140/331 - (42%) Gaps:64/331 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRRKTPCGFCMAVFKWIPVLF-----ITAVIAWSYYAYVVELCIRNSENRIGMIFMLLFYHLFLT 66
            |.|:.||||...:..:..|.:     |..|:..:|...|  .|..:     |.:|.::   |||.
Zfish     5 RCRRDPCGFICLILTYFSVFYADYVVIQYVLIPAYSGSV--WCTLH-----GSVFNII---LFLL 59

  Fly    67 LFMWSYWRTIMTSVGRIPDQWRIPDEEVSRLFRADSPDTQKRILNNFARDLPVTNRTMNGSVRFC 131
            |...|  :.:.:..|.:|    :|:..:      |..|.:.:  :|...|......|:      |
Zfish    60 LACHS--KAVFSDPGMVP----LPETAI------DFSDLRSQ--SNRLNDRGCEGWTV------C 104

  Fly   132 EKCKIIKPDRAHHCSVCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFLGYALVYCLYVAFTSLHDF 196
            .:|:..:|.|||||.||..|:.:|||||||:||||...|.|||:.||.|..:..||.....:..:
Zfish   105 SRCETYRPPRAHHCRVCQRCIRRMDHHCPWINNCVGELNQKYFIQFLFYTGMASLYSMALVVSAW 169

  Fly   197 VEFWKV-----GAYDNNGYSAQGQLNASGMGRFHILFLFFI-----AIMFAISLVSLFGYHIYLV 251
            |  |::     |..:..|..|..:         |::...:|     :|:|.:.::.:|...:..:
Zfish   170 V--WRIRSEREGDEEKEGEEAPSK---------HLIVAHYIILLVESILFGVFVLVIFYDQLVSI 223

  Fly   252 LVNRTTLESFRAPIFRVGGPDKNGYNLG-----RYANFCEVFG-DDWQYWFLPVFSSRGD--GYS 308
            :.:.|.:|..|..:.:....:....::.     :.|...|||| .....|..|:.|:...  |.|
Zfish   224 ITDETPIEQMRNRLIKDKANNSQPSHVAHTRKPKIALLREVFGRGSILCWLFPLHSTPPSVGGIS 288

  Fly   309 YPTSSD 314
            |....|
Zfish   289 YSALPD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 zf-DHHC 129..259 CDD:279823 42/139 (30%)
zgc:77880NP_957185.1 zf-DHHC 12..>164 CDD:303066 54/181 (30%)
zf-DHHC 103..235 CDD:279823 43/148 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.