DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1407 and Patsas

DIOPT Version :10

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster


Alignment Length:331 Identity:77/331 - (23%)
Similarity:116/331 - (35%) Gaps:131/331 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KWIP--------------------VLFITAVIAWSYYAYVVEL------CIRNSENRIGMIFMLL 59
            :|||                    .||:.:|:.|.|..|::..      .:|.|           
  Fly   345 RWIPSVSESWGWLFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRS----------- 398

  Fly    60 FYHLFLTLFMWSYWRTIMTSVGRIPDQWRIPDEEVSRLFRAD------SPDTQKRILNNFARDLP 118
             ::.|:      ||..:|..      .|.|.:       |.|      |.|...|.:    :.:|
  Fly   399 -HYCFI------YWNAVMWI------SWAIAN-------RRDPGYIPLSSDAYYRAI----KQIP 439

  Fly   119 VTNRTMNGSV---RFCEKCKIIKPDRAHHCSVCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFL-- 178
            ..::....:|   |.|..|:.::|.||.||.||:.||...|||||::.|||...|..:|.||:  
  Fly   440 YFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLS 504

  Fly   179 --------GYALVYCLYV-AFTSLHDFVEFWKVGAYDNNGYSAQGQLNASGMGRFHILFLFFIAI 234
                    .|...||:.: .||.|:                 ..|.:.|          :.|..:
  Fly   505 VAVNCSFTIYFACYCVMIEGFTMLY-----------------VLGLIEA----------VVFCGL 542

  Fly   235 MFAISLVSLFGYHIYLVLVNRTTLESF---RAPIFRVGGPDKNG-----YNLGRYANFCEVF--- 288
            .:.::..|:.  |   ..:|.||.|.|   |.|..|    ||.|     ::.|...|..|.|   
  Fly   543 GWILTCTSIL--H---ACMNLTTNEMFNYKRYPYLR----DKRGRYQNPFSRGPILNLLEFFVCL 598

  Fly   289 ---GDD 291
               |||
  Fly   599 PDRGDD 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 DHHC 129..259 CDD:396215 38/140 (27%)
PatsasNP_001356957.1 ANKYR 99..343 CDD:440430
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
DHHC 453..567 CDD:396215 40/145 (28%)
Blue background indicates that the domain is not in the aligned region.

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