DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1407 and GABPI

DIOPT Version :10

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:286 Identity:58/286 - (20%)
Similarity:104/286 - (36%) Gaps:85/286 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRRKTPCGFCMAVFKWIPVLFITAVIAWSYYAYVVELCIRNSENRIGMIFMLLFYHLFLTLFMWS 71
            :|..|...|.::   |:.......:|.:.:...::||.  ..||     :.|:|:.......::|
  Fly   141 KRTATRTNFFLS---WLVFSVFYMIIIFEFQVPLLELA--PEEN-----YALMFFSCAALYCLYS 195

  Fly    72 YWRTIMTSVGRIPDQW-RIPDEEVSRLFRADSPDTQ---------KRIL---NNFARDLPVTNRT 123
              ...::.:..:..|: ..|.:|:..:..|.|.:.|         :.:|   ::...|:....|:
  Fly   196 --AKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERS 258

  Fly   124 --MNGSVRFCEKCKIIKPDRAHHCSVCSCCVLKMDHHCPWVNNCVNFYNYKYFV---------LF 177
              |:|....||.|:.:.|.||:||.||..||.:.|||..|:|.|:...||.:::         |.
  Fly   259 GLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALL 323

  Fly   178 LG---------------------------------------------YALVYCLYVAFTSLHDFV 197
            ||                                             |||:...|:||.......
  Fly   324 LGANLTLTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAY 388

  Fly   198 EFWKVGAYDNNGYSAQGQLNASGMGR 223
            .:||    .:..:..:...||:|..|
  Fly   389 LWWK----GSTLHEYKRTSNAAGRNR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 DHHC 129..259 CDD:396215 35/149 (23%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 32/140 (23%)

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