DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1407 and zdhhc13

DIOPT Version :10

Sequence 1:NP_001286264.1 Gene:CG1407 / 36043 FlyBaseID:FBgn0033474 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_002942880.3 Gene:zdhhc13 / 100493145 XenbaseID:XB-GENE-997024 Length:612 Species:Xenopus tropicalis


Alignment Length:315 Identity:74/315 - (23%)
Similarity:116/315 - (36%) Gaps:97/315 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IPVLFITAVIAW---SYYAYVVELCIRNSENRIGMIFMLLFYHLFLTLFMWSYWRTIMTSVGRIP 84
            :|.:..:..|.|   :::.|.:....|.:.....:|.|||.::.|        ::|..|..|.|.
 Frog   337 LPAIIFSCCIFWMFLTWFIYFLPGLARVAFQLPFIISMLLLFYFF--------YKTWCTDPGYIK 393

  Fly    85 DQWRIPDEEVSR---LFRADSPDTQKRILNNFARDLPVTNRTMNGSVRFCEKCKIIKPDRAHHCS 146
            .     .||.||   :..|::.....|:                    ||..|.:.||.|:.||.
 Frog   394 S-----SEEESRQTIITLAEAGCLDARL--------------------FCTSCLVKKPLRSMHCH 433

  Fly   147 VCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFL------GYALVYCLYVAFTSLHDFVEFWK---- 201
            .|:.||.:.|.||.|...|:...|..:|||||      |..::|...|          :|.    
 Frog   434 ACNSCVARFDQHCVWTGQCIGAGNQHFFVLFLASLAVVGNWMIYATSV----------YWSDHCG 488

  Fly   202 VGAYDNNGYSAQGQL-NASGMGRFHILFLFFIAIMFAI-----SLVSLFGY-HIYLVLVNRTTLE 259
            :|:..:..::...|: |.|..    :|::|.:...|.:     .||.||.. .:.|....|.:|:
 Frog   489 MGSRKDGIWATLSQIVNCSPW----VLYIFCLVSAFTVWATLMLLVQLFQISFLGLTTQERISLQ 549

  Fly   260 ----------SFRAPIFRVGGPDKNGYNLGRYANF--CEVFG------DDW--QY 294
                      |.|...|..|       .|...|:|  |:.||      .||  ||
 Frog   550 VQNRHLKHQVSLRRTPFNRG-------CLQNLADFFHCQCFGLIKSQPIDWTKQY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1407NP_001286264.1 DHHC 129..259 CDD:396215 39/146 (27%)
zdhhc13XP_002942880.3 ANKYR 28..260 CDD:440430
ANK repeat 71..102 CDD:293786
ANK repeat 104..136 CDD:293786
ANK repeat 138..169 CDD:293786
ANK repeat 171..237 CDD:293786
DHHC 327..>549 CDD:418707 59/258 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.