DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12128 and UPA2

DIOPT Version :10

Sequence 1:NP_610543.1 Gene:CG12128 / 36042 FlyBaseID:FBgn0033473 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_014041.1 Gene:UPA2 / 855358 SGDID:S000004927 Length:317 Species:Saccharomyces cerevisiae


Alignment Length:305 Identity:83/305 - (27%)
Similarity:129/305 - (42%) Gaps:53/305 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DKPNPST--LSIAVPGSILENAQSNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSY 129
            :||...|  .|:.:|.:::.:.::.....:...|:|:.|.:|.|:||::.:|.....|.:.|   
Yeast    11 EKPLSQTRHYSLCIPTTLVSDCRNLSQITHKVYQVAKFASLFNVSEVVILEDNSQVDATKKK--- 72

  Fly   130 EADGEGSSTGTVRSSSLQLARILQYLECPQYLRKYFF--PLHKDLKYSGLLNPLDTPHHLR--QQ 190
                       :.::.|.|| :|||...|.|||...|  .....|..:..|..|.|....|  :|
Yeast    73 -----------ISTAKLILA-LLQYFVTPPYLRNTVFNEKFRPYLTAASKLPRLSTLPFTRYQKQ 125

  Fly   191 SKFRYREGVICDK-----------KAKEGHSYANVGLLNDVLVDKAIEP-GVRVTVKMEPQSESC 243
            ...|||||:....           |..:...|.|:|....:.:...:.| ..|||:     ....
Yeast   126 DHGRYREGLTIKMQKPTLARKKIGKVFKQTKYINIGKSKALALQSQLVPINARVTI-----DTIT 185

  Fly   244 RKQRGTLVSPDEPRRE-TGV--YWGYQVRIAHSMSEIFTKSPYATGY--DVTVGTSDRGTNVHE- 302
            ||    :|||.|...: ||:  .:||..|||.|.:::|.|.|...||  .|.|..:.|.|::.| 
Yeast   186 RK----IVSPQEAYGDFTGLDSQYGYYTRIASSFTDLFMKGPLKEGYTQSVYVPLTTRDTSIPEL 246

  Fly   303 --VPNRSYNFNHMLIVFGGLQGLESALANDEKLTVD--DPELLFD 343
              :|....| .|:|:||.....|..|...|:...||  .|:..||
Yeast   247 SSLPTAETN-PHILLVFSTWDTLARAFKLDQDQFVDCQGPQEFFD 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12128NP_610543.1 Methyltrn_RNA_3 73..361 CDD:460611 81/299 (27%)
UPA2NP_014041.1 Methyltrn_RNA_3 19..313 CDD:460611 80/297 (27%)

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