DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12128 and UPA1

DIOPT Version :10

Sequence 1:NP_610543.1 Gene:CG12128 / 36042 FlyBaseID:FBgn0033473 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_011799.3 Gene:UPA1 / 853200 SGDID:S000003515 Length:341 Species:Saccharomyces cerevisiae


Alignment Length:397 Identity:98/397 - (24%)
Similarity:154/397 - (38%) Gaps:109/397 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HKSWKKVNEERKALKRQRKQDKLLKELQQAKEAESQAGKAANEVQAKDKPNPSTLSIAVPGSILE 84
            |||....:||..|   ::.:..||| |::..:.||...|               .||.:|.::::
Yeast     5 HKSESLKHEEGAA---KKAKTGLLK-LKKIMDIESNVVK---------------YSICIPTTVID 50

  Fly    85 NAQSNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSYEADGEGSSTGTVRSSSLQLA 149
            |..:.|...:.|.||||.|.:|.|.|:||.|........:..||.|         |: |..|.||
Yeast    51 NCNNLEQVTFTAYQIARTAVLFNVQEIIVLDQSKDKKHEKKSRSKE---------TI-SDCLLLA 105

  Fly   150 RILQYLECPQYLRKYFFPLHKD--LKYSGLLNPLDTPHHLRQQSKFRYREGVICDKKAKEGHSYA 212
            .:|||...|..|....|.....  ||.:....||:....:...::..|:||:...:.:.:|.|  
Yeast   106 TLLQYFVTPPNLLDTTFKKKNKLYLKCASTFPPLNQLPFMNASAEQHYKEGLSIARDSSKGKS-- 168

  Fly   213 NVGLLNDVLVDK---------AIEPGVRVTVKMEPQSESCRKQRGTLVSPDEPRRETGVYWGYQV 268
            :..|.|.|.:.|         .|....||||..|      ||:   :|||.:..:  |...||.|
Yeast   169 DDALTNLVYIGKNQIITLSNQNIPNTARVTVDTE------RKE---VVSPIDAYK--GKPLGYHV 222

  Fly   269 RIAHSMSEIF---------------------------TKSPYATGYDVTVGTSDRGTNVHEVPNR 306
            |:|.:::|:.                           ||.||......: .||::..|:      
Yeast   223 RMASTLNEVSEGYTKIVWVNSGDFHYDEELSKYHKVETKLPYIAKLKKS-STSEKPCNI------ 280

  Fly   307 SYNFNHMLIVFGGLQGLESALANDEKLTVDDPELLFDHYVN-------VLPRQGSRTIRTEEALL 364
                   |::||....|:......:   ::...|  .||.:       .:| ||:  |..:::|.
Yeast   281 -------LLIFGKWGHLKRCFRRSD---LESSSL--HHYFSGQLQFPASVP-QGN--IPIQDSLP 330

  Fly   365 IALAALQ 371
            |||...|
Yeast   331 IALTMFQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12128NP_610543.1 Methyltrn_RNA_3 73..361 CDD:460611 80/332 (24%)
UPA1NP_011799.3 Methyltrn_RNA_3 40..336 CDD:460611 84/340 (25%)

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