DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12128 and spot-1

DIOPT Version :10

Sequence 1:NP_610543.1 Gene:CG12128 / 36042 FlyBaseID:FBgn0033473 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_498602.1 Gene:spot-1 / 176028 WormBaseID:WBGene00015160 Length:378 Species:Caenorhabditis elegans


Alignment Length:369 Identity:141/369 - (38%)
Similarity:212/369 - (57%) Gaps:41/369 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WKKVNEERKALKRQRKQDKLLKELQQAKEAESQAGKAANEVQAKDKPNPSTLSIAVPGSILENAQ 87
            |:|:.:|    |:::.::|::||.::||:|         :::..|...|.|:||||||..|.|||
 Worm    30 WRKMKDE----KKRKNEEKIIKEAEEAKKA---------KIEKVDHTPPFTISIAVPGQFLNNAQ 81

  Fly    88 SNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSYEADGEGSSTG------TVRSSSL 146
            |.|||.|:||||||||.::||:|:|::|:    :.|.|..:..|...|:..|      |......
 Worm    82 SAELRTYMAGQIARAATLYRVDEIIIYDE----SCRMTDEAVNAYYNGTWQGNLIPAETNYEGCF 142

  Fly   147 QLARILQYLECPQYLRKYFFPLHKDLKYSGLLNPLDTPHHLRQQSK-FRYREGVICDKKAKEGHS 210
            .||:||:||||||||||..||:.|.||.:|||||||..|||:...| .|:||||:..|::|:|..
 Worm   143 YLAKILEYLECPQYLRKDLFPIQKPLKNAGLLNPLDAQHHLKYDEKTLRFREGVVLKKRSKDGRG 207

  Fly   211 -YANVGLLNDVLVDK---AIEPGVRVTVKMEPQSESCRKQRGTLVSPDEPRRETGVYWGYQVRIA 271
             ..|:||..:..:|.   .:.|..||||:::..:|.|:..||::.|.....||||:||||.||:.
 Worm   208 PICNIGLEKEFEIDSDAVQLPPYTRVTVEIKNLTEQCKLYRGSITSGATVTRETGLYWGYSVRLM 272

  Fly   272 HSMSEIFTKSPYATGYDVTVGTSDRGTNVHEVPNRSYNFNHMLIVFGGLQGLESALANDEKLTVD 336
            ..:.::.    .|..:|:..|.|.||....::.....|...:|:||||:.|:::|:.::|.....
 Worm   273 TGLQKVL----QAKKFDIVAGVSPRGKLASQMDVCILNKPKILLVFGGVAGVDAAVESEELAEWR 333

  Fly   337 DPELLFDHYVNVLPR-----QGSRTIRTEEALLIALAALQEKLQ 375
            ..|..||    ||.|     .|||:.|.||.:|..||.:|..|:
 Worm   334 RAEDAFD----VLIRTTSLSNGSRSERVEENVLSVLAQVQCHLE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12128NP_610543.1 Methyltrn_RNA_3 73..361 CDD:460611 122/303 (40%)
spot-1NP_498602.1 Methyltrn_RNA_3 67..366 CDD:460611 125/310 (40%)

Return to query results.
Submit another query.