DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and prkar1b

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001072922.1 Gene:prkar1b / 780384 XenbaseID:XB-GENE-481247 Length:380 Species:Xenopus tropicalis


Alignment Length:380 Identity:148/380 - (38%)
Similarity:216/380 - (56%) Gaps:25/380 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSDSSRRIQVPEELK------------EVLLQFSISFLVEQPPDVIDYAVEYFTKLQSERPSVS 53
            |::.||..:: .|.||            ::|.:..::..:.:|...:.:..|:|.||:.|.....
 Frog     1 MAASSSSNLE-DESLKGCEVYVQKYNIQQLLKECIVNLCIAKPDRPMKFLREHFEKLEKEECKQI 64

  Fly    54 HTDQSTDDQLSVNSQDADAEPP-----VMASSRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRA 113
            ...|.::.|  .:|.|.:..||     |.|..||..|.||.|..|  |.......|.||..:...
 Frog    65 LAQQKSNSQ--SDSHDDEISPPPPNPVVKARRRRGGVSAEVYTEE--DAVSYVRKVIPKDYKTMT 125

  Fly   114 RLVESVKNVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHI 178
            .|.:::...:||..|:..:.:.:.||||......|:.:|:|||:|||||||:.|...||:|.:.:
 Frog   126 ALAKAISKNVLFAHLDDNERSDIFDAMFPVNHIAGETVIQQGDEGDNFYVIDQGEADVYVNGEWV 190

  Fly   179 NTYNHTGLFGELALLYNMPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPML 243
            ......|.||||||:|..||||||:|:|...||.:||.::||||:.|..||||||||.|:.|.:|
 Frog   191 TNIGEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSIL 255

  Fly   244 KALQNYERMNLADALVSKSYDNGERIIKQGDAADGMYFIEEGTVSVRMDQDDAE--VEISQLGKG 306
            ::|..:||:.:||||....:::||:|:.||:..|..:.|.|||.||...:.|.|  ||:.:||..
 Frog   256 ESLDKWERLTVADALEPVQFEDGEKIVVQGEPGDDFFIITEGTASVLQRRSDNEEYVEVGRLGPS 320

  Fly   307 QYFGELALVTHRPRAASVYATGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYES 361
            .||||:||:.:|||||:|.|. |.:|...||...|||:||||.:|:||||..|.|
 Frog   321 DYFGEIALLLNRPRAATVVAR-GPLKCVKLDRPRFERVLGPCSEILKRNIQRYNS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 9/49 (18%)
CAP_ED 124..233 CDD:237999 52/108 (48%)
CAP_ED 242..356 CDD:237999 53/115 (46%)
prkar1bNP_001072922.1 DD_RIbeta_PKA 10..63 CDD:213049 10/53 (19%)
CAP_ED 136..245 CDD:237999 52/108 (48%)
CAP_ED 254..369 CDD:237999 53/115 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X421
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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