DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and prkar1b

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001070091.1 Gene:prkar1b / 767685 ZFINID:ZDB-GENE-060929-580 Length:380 Species:Danio rerio


Alignment Length:376 Identity:147/376 - (39%)
Similarity:214/376 - (56%) Gaps:24/376 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSRRIQVPEELK------------EVLLQFSISFLVEQPPDVIDYAVEYFTKLQSERPSVSHTDQ 57
            ||..::..|.||            ::|.:..::..:.:|...:.:..|:|.||:.|........|
Zfish     4 SSSNLEEDESLKGCEVFVQKHNIQQILKECIVNLCIAKPERPMKFLREHFEKLEKEECKQIMARQ 68

  Fly    58 STDDQLSVNSQDADAEPP-----VMASSRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVE 117
            .::.|  .:|.|.:..||     |.|..||..|.||.|..|  |.......|.||..:....|.:
Zfish    69 KSNSQ--SDSHDDEVSPPPPNPVVKARRRRGGVSAEVYTEE--DAVSYVRKVIPKDYKTMTALAK 129

  Fly   118 SVKNVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYN 182
            ::...:||..|:..:.:.:.||||......|:.:|:|||:|||||||:.|...||:|.:.:.:..
Zfish   130 AISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGDEGDNFYVIDQGEVDVYVNGEWVTSIG 194

  Fly   183 HTGLFGELALLYNMPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQ 247
            ..|.||||||:|..||||||:|:|...||.:||.::||||:.|..||||||||.|:.|.:|::|.
Zfish   195 EGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLD 259

  Fly   248 NYERMNLADALVSKSYDNGERIIKQGDAADGMYFIEEGTVSVRMDQDDAE--VEISQLGKGQYFG 310
            .:||:.:||||....:::||:|:.||:..|..:.|.|||.||...:.|.|  ||:.:||...|||
Zfish   260 KWERLTVADALEPVQFEDGEKIVVQGEPGDDFFIITEGTASVLQRRSDNEEYVEVGRLGPSDYFG 324

  Fly   311 ELALVTHRPRAASVYATGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYES 361
            |:||:.:|||||:|.|. |.:|...||...|||:||||.:|:||||..|.|
Zfish   325 EIALLLNRPRAATVVAR-GPLKCVKLDRPRFERVLGPCSEILKRNIQRYNS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 9/49 (18%)
CAP_ED 124..233 CDD:237999 52/108 (48%)
CAP_ED 242..356 CDD:237999 53/115 (46%)
prkar1bNP_001070091.1 DD_RIbeta_PKA 10..63 CDD:213049 10/52 (19%)
CAP_ED 136..245 CDD:237999 52/108 (48%)
CAP_ED 254..369 CDD:237999 53/115 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54324
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100449
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2591
SonicParanoid 1 1.000 - - X421
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.860

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