DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and CG4839

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster


Alignment Length:368 Identity:96/368 - (26%)
Similarity:163/368 - (44%) Gaps:21/368 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDSSRRIQVPEELKEVLLQFSISFLVEQPPDVIDYAVEYFTKLQSERPSVSHTDQSTDDQLSVNS 67
            :||.||.:|     ..:...:|......||:::........:.:..........|....|.....
  Fly   301 TDSQRRRRV-----STMPDINIPPAPPLPPELLVPGTPLHLRKKRSMERQQQQKQQEQQQQQEIQ 360

  Fly    68 QDADAEPPVMASSRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVESV------------- 119
            |||......||.:......:::..|:....:.|...|.|....|....:||:             
  Fly   361 QDATNSQDQMAGAEESHKSSDSSTPKTHRVEGGLIYVRPNFPIQSDIEIESIAKDEGTRNLIRTA 425

  Fly   120 --KNVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYN 182
              :|..|...::||:...|::||.....:....|||:.::|...||...|.|.|....:.:.::.
  Fly   426 IERNDFLNNLMDKERKEMVINAMAPASYRKHSLIIREHEEGSEIYVSAEGQYDVIRGGQLVASFG 490

  Fly   183 HTGLFGELALLYNMPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQ 247
            ...:|||||:|||.||.|:::|.|...:|.:.|:|||.|:..|..|:|:...:.|.|.|.|:...
  Fly   491 PATVFGELAILYNAPRQASIEAATDARVWKIARETFRAIMQISGSREREENLQFLRSAPFLQEFD 555

  Fly   248 NYERMNLADALVSKSYDNGERIIKQGDAADGMYFIEEGTVSV-RMDQDDAEVEISQLGKGQYFGE 311
            ....:.:.|.|..|.|:....|:::|:..:..|.|..|||:: ::|:...|..::...:|.||||
  Fly   556 QSLLLKVVDLLQRKFYETDSCIVREGELGNEFYIIRCGTVTIKKLDEQQQEQIVANRKRGDYFGE 620

  Fly   312 LALVTHRPRAASVYATGGVVKLAFLDVKAFERLLGPCMDIMKR 354
            .||:....|.|||||.....::..||.:||...||....:.::
  Fly   621 QALLNADVRQASVYADAPGTEVLMLDREAFISYLGTIKQLREK 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 4/37 (11%)
CAP_ED 124..233 CDD:237999 37/108 (34%)
CAP_ED 242..356 CDD:237999 33/114 (29%)
CG4839NP_609349.1 Crp 428..577 CDD:223736 46/148 (31%)
CAP_ED 431..539 CDD:237999 36/107 (34%)
Crp 544..>650 CDD:223736 32/105 (30%)
CAP_ED 550..663 CDD:237999 33/112 (29%)
S_TKc 695..951 CDD:214567
STKc_cGK 700..957 CDD:270724
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 43 1.000 Domainoid score I744
eggNOG 1 0.900 - - E1_COG0664
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.810

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