DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and Prkg2

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_037144.1 Gene:Prkg2 / 25523 RGDID:3401 Length:762 Species:Rattus norvegicus


Alignment Length:362 Identity:96/362 - (26%)
Similarity:180/362 - (49%) Gaps:28/362 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QVPEELKEVLLQFSISFLVEQPPDVIDYAVEYFTKLQSERPSVS-HTDQSTDDQLSVNSQ----- 68
            ::.|||:...:|      :.:..|||.  |:..:.||:....|. ...:.|...:|::|:     
  Rat    67 ELTEELQSKCIQ------LNKLQDVIH--VQGGSPLQASPDKVPLDVHRKTSGLVSLHSRRGAKA 123

  Fly    69 DADAEPPVMASSRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVESVKNVLLFRSLEKEQM 133
            ...|||    :||       .||.....:.....|...|...::..:.:::......:.|:.:|:
  Rat   124 GVSAEP----TSR-------TYDLNKPPEFSFEKARVRKDSSEKKLITDALNKNQFLKRLDPQQI 177

  Fly   134 NQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYNHTGLFGELALLYNMPR 198
            ..:::.|:.|..|.|.:|::||:.|::.:|:..|..:|:..:|.:::......|||||:|||..|
  Rat   178 KDMVECMYGRNYQQGSYIVKQGEPGNHIFVLAEGRLEVFQGEKLLSSIPMWTTFGELAILYNCTR 242

  Fly   199 AATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNLADALVSKSY 263
            .|:|:|.|:...||:||:.|:.|:.::|..:.:.|...|.||.:||.|...:...:.|.|..:.|
  Rat   243 TASVKAITNVKTWALDREVFQNIMRRTAQARDEEYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYY 307

  Fly   264 DNGERIIKQGDAADGMYFIEEGTVSVRMDQD--DAEVEISQLGKGQYFGELALVTHRPRAASVYA 326
            |.|:.||::|:.....:.:.:|.|.|....:  |....|..|.||:||||.||::...|:|::.|
  Rat   308 DKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDVRSANIIA 372

  Fly   327 TGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYESQL 363
            ....|....:|.:.|.:.:| ..|.:::.::.|.:.|
  Rat   373 EENDVACLVIDRETFNQTVG-TFDELQKYLEGYVATL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 10/37 (27%)
CAP_ED 124..233 CDD:237999 34/108 (31%)
CAP_ED 242..356 CDD:237999 33/115 (29%)
Prkg2NP_037144.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..138 9/36 (25%)
Crp 162..>285 CDD:223736 37/122 (30%)
cGMP-binding, high affinity, cAMP-binding, moderate affinity. /evidence=ECO:0000250|UniProtKB:Q13237 168..283 36/114 (32%)
CAP_ED 168..273 CDD:237999 34/104 (33%)
cGMP-binding, high affinity, cAMP-binding, low affinity. /evidence=ECO:0000250|UniProtKB:Q13237 286..416 35/124 (28%)
CAP_ED 286..401 CDD:237999 33/115 (29%)
PTZ00263 417..752 CDD:140289
STKc_cGK 459..718 CDD:270724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 740..762
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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