DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and Prkar1b

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_038945042.1 Gene:Prkar1b / 25521 RGDID:3392 Length:381 Species:Rattus norvegicus


Alignment Length:352 Identity:141/352 - (40%)
Similarity:208/352 - (59%) Gaps:8/352 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKEVLLQFSISFLVEQPPDVIDYAVEYFTKLQSERPSVSHTDQSTDDQLSVNSQDADAEPP---V 76
            :::||.:..:...|.:|...:.:..|:|.||:.|........|.::.|...:.::....||   |
  Rat    27 IQQVLKECIVHLCVAKPDRPLRFLREHFEKLEKEENRQILARQKSNSQCDSHDEEISPTPPNPVV 91

  Fly    77 MASSRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVESVKNVLLFRSLEKEQMNQVLDAMF 141
            .|..||..|.||.|..|  |.......|.||..:....|.:::...:||..|:..:.:.:.||||
  Rat    92 KARRRRGGVSAEVYTEE--DAVSYVRKVIPKDYKTMTALAKAISKNVLFSHLDDNERSDIFDAMF 154

  Fly   142 ERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYNHTGLFGELALLYNMPRAATVQAET 206
            ......|:.:|:||::|||||||:.|...||:|.:.:...:..|.||||||:|..||||||:|:|
  Rat   155 PVTHIDGETVIQQGNEGDNFYVIDQGEVDVYVNGEWVTNISEGGSFGELALIYGTPRAATVKAKT 219

  Fly   207 SGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNLADALVSKSYDNGERIIK 271
            ...||.:||.::||||:.|..||||||||.|:.|.:|::|:.:||:.:||||....:::||:|:.
  Rat   220 DLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVV 284

  Fly   272 QGDAADGMYFIEEGTVSV--RMDQDDAEVEISQLGKGQYFGELALVTHRPRAASVYATGGVVKLA 334
            ||:..|..|.|.|||.||  |...::..||:.:||...||||:||:.:|||||:|.|. |.:|..
  Rat   285 QGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVAR-GPLKCV 348

  Fly   335 FLDVKAFERLLGPCMDIMKRNIDDYES 361
            .||...|||:||||.:|:||||..|.|
  Rat   349 KLDRPRFERVLGPCSEILKRNIQRYNS 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 8/33 (24%)
CAP_ED 124..233 CDD:237999 51/108 (47%)
CAP_ED 242..356 CDD:237999 53/115 (46%)
Prkar1bXP_038945042.1 DD_RIbeta_PKA 11..64 CDD:213049 9/36 (25%)
CAP_ED 137..246 CDD:237999 51/108 (47%)
CAP_ED 255..370 CDD:237999 53/115 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54324
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100449
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X421
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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