DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R2 and pkg-2

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_741467.1 Gene:pkg-2 / 177659 WormBaseID:WBGene00015650 Length:617 Species:Caenorhabditis elegans


Alignment Length:379 Identity:87/379 - (22%)
Similarity:152/379 - (40%) Gaps:85/379 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VMASSRRKSVFAEAYDPEADD----DDDGATAVFPKTDEQRARLV--------ESVKNVL----L 124
            ::|....|....|....|.|:    :....||:..:.|.|..|.:        |::.|.|    .
 Worm     8 LLAELELKDDIIEQLRKELDEYRMMNTTRKTAISSEPDIQVKRPIIGKSDAAFETIGNALRLNSF 72

  Fly   125 FRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYNHTGLFGE 189
            .|:|:..|:.::..||:..:|..|..||||||.|...|||:.|..:|..:::.:.|.....||||
 Worm    73 LRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEGKVQVVKDNRFVRTMEDGALFGE 137

  Fly   190 LALLYNMPRAATVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNL 254
            ||:|::..|.|||:|..|..|||::|..|..|:::||..|...::..|..............:.:
 Worm   138 LAILHHCERTATVRAIESCHLWAIERNVFHAIMMESAREKTMSFKRHLKYSARFGGYPEEVLLRI 202

  Fly   255 ADALVSKSYDNGERII-----------------KQGDAAD-----------------GMYFIEEG 285
            |:......||..|.::                 .||:.:.                 ..:|:.||
 Worm   203 AEFCTEMRYDAREELVVKPQYVYLVCRGSVLCDDQGEVSKIVAGQDFELRCGRKGRFERFFVLEG 267

  Fly   286 ---TVSVRMDQ----------------------DDAEVE------ISQLGKGQYFGELALVTHRP 319
               .:.:.::|                      ::|:||      :|.||.|. ||.:.||  |.
 Worm   268 PAHLIKMHVEQLCKALDTTDLDDEIRPRASSTIEEADVELEDLQRVSTLGMGG-FGRVELV--RS 329

  Fly   320 RAASVYATGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYESQLVKIFGSKNNI 373
            .::..||...:.|...::.|....::.....:|:.: :||..::.|.:.....|
 Worm   330 ASSRTYALKIMNKAHIVETKQESHVVSERRILMQCD-NDYIVRMYKTYRDSEKI 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046
CAP_ED 124..233 CDD:237999 42/108 (39%)
CAP_ED 242..356 CDD:237999 27/178 (15%)
pkg-2NP_741467.1 Crp 66..>173 CDD:223736 40/106 (38%)
CAP_ED 72..173 CDD:237999 39/100 (39%)
PTZ00263 295..599 CDD:140289 21/92 (23%)
STKc_cGK 316..572 CDD:270724 17/71 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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