DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-R2 and PNPLA6

DIOPT Version :9

Sequence 1:NP_523671.1 Gene:Pka-R2 / 36041 FlyBaseID:FBgn0022382 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001159583.1 Gene:PNPLA6 / 10908 HGNCID:16268 Length:1375 Species:Homo sapiens


Alignment Length:366 Identity:78/366 - (21%)
Similarity:143/366 - (39%) Gaps:50/366 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ISFLVEQPPDV--------IDYAVEYFTKLQSERPSVSHTDQSTDDQLSVNSQDADAEPPVMASS 80
            :|..|..|.|:        .|:.:.|    :..|.|||..::::...|:..::....||      
Human   415 LSRCVSMPGDISGLQGGPRSDFDMAY----ERGRISVSLQEEASGGSLAAPARTPTQEP------ 469

  Fly    81 RRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLVESVKNVL--LFRSLEKEQMNQVLDAMFER 143
            |.:...|..|....|:...|.....|....|.:.:.|:.|..|  |.|..:...:|   ..:...
Human   470 REQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLN---SRVLLH 531

  Fly   144 KVQPGDFIIRQGDDGDNFYVIESGVYKVYINDKHINTYNHTGLF--------GELALLYNMPRAA 200
            ..:.|..|.||||...:.:.:..|...||  .:.|:......||        |:||:|...|...
Human   532 HAKAGTIIARQGDQDVSLHFVLWGCLHVY--QRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIF 594

  Fly   201 TVQAETSGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNLADALVSKSYDN 265
            |::|:.......:.:..|..|:       |.....:|::...:.|..:.....:..|:...:.:.
Human   595 TLRAQRDCTFLRISKSDFYEIM-------RAQPSVVLSAAHTVAARMSPFVRQMDFAIDWTAVEA 652

  Fly   266 GERIIKQGDAADGMYFIEEGTVSVRMDQDDAEVE-ISQLGKGQYFGELALVTHRPRAASVYATGG 329
            |..:.:|||.:|..|.:..|.:...:.:...:.| :.:.|:|...|.:..:|.:|||.:|:|...
Human   653 GRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPRATTVHAVRD 717

  Fly   330 VVKLAFLDVKAFERLLGPCMDIMKRNIDDYESQLVKIFGSK 370
             .:||    |..|..||.    :||......::|:.:...|
Human   718 -TELA----KLPEGTLGH----IKRRYPQVVTRLIHLLSQK 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R2NP_523671.1 DD_RII_PKA 11..49 CDD:213046 6/32 (19%)
CAP_ED 124..233 CDD:237999 25/116 (22%)
CAP_ED 242..356 CDD:237999 27/114 (24%)
PNPLA6NP_001159583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
CAP_ED 195..316 CDD:237999
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..436 4/20 (20%)
Atrophin-1 <354..502 CDD:331285 20/96 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..472 4/28 (14%)
CAP_ED 512..622 CDD:237999 26/121 (21%)
CAP_ED 635..743 CDD:237999 26/116 (22%)
Pat_PNPLA6_PNPLA7 964..1269 CDD:132864
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 985..990
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 1012..1016
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 1134..1136
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1306..1375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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