DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and TRIP13

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_004228.1 Gene:TRIP13 / 9319 HGNCID:12307 Length:432 Species:Homo sapiens


Alignment Length:465 Identity:110/465 - (23%)
Similarity:169/465 - (36%) Gaps:124/465 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 HGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFG-----RFDREIDIGIPDATG 398
            |.||.:|..|      ...|:..:|.|....||.|.:      ||     .||.      |..|.
Human    22 HVEVHQRGSS------TAKKEDINLSVRKLLNRHNIV------FGDYTWTEFDE------PFLTR 68

  Fly   399 RLEVLRIHTKNMKLHDD--VDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDA 461
            .::.:.|....:|:.|.  :||                |.|:.|        :.:..|.:|...:
Human    69 NVQSVSIIDTELKVKDSQPIDL----------------SACTVA--------LHIFQLNEDGPSS 109

  Fly   462 EVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFL 526
            |   :|....||...|.....|:|....:       |..:.....||..|.:.|...:...||.:
Human   110 E---NLEEETENIIAANHWVLPAAEFHGL-------WDSLVYDVEVKSHLLDYVMTTLLFSDKNV 164

  Fly   527 KFGMQP-SRGVLFYGPPGCGKTLLAKAIANEC---------QANFISVKGPELLTMWFGESEANV 581
            ...:.. :|.||.:||||.|||.|.||:|.:.         ....|.:....|.:.||.||...|
Human   165 NSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLV 229

  Fly   582 RDIFDKARSA-----APCVLFFDELDSIAKARGG-NVGDAGGAADRVINQILTEMDGMGAKKNVF 640
            ..:|.|.:..     |...:..||::|:..||.. ..|.....|.||:|.:||::|.:....||.
Human   230 TKMFQKIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVV 294

  Fly   641 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANL--------------RKSPLA-K 690
            |:..:|..:.||.|.:  .|.|...||..|   |..||.|..|              |:..|. :
Human   295 ILTTSNITEKIDVAFV--DRADIKQYIGPP---SAAAIFKIYLSCLEELMKCQIIYPRQQLLTLR 354

  Fly   691 EVD---------------LTYIAKVTQGFSGADLTEICQRACKL--------------AIRQAIE 726
            |::               |..|::.::|.||..|.::...|..|              |:..|::
Human   355 ELEMIGFIENNVSKLSLLLNDISRKSEGLSGRVLRKLPFLAHALYVQAPTVTIEGFLQALSLAVD 419

  Fly   727 AEIRREKERA 736
            .:....|:.|
Human   420 KQFEERKKLA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 110/465 (24%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434 15/57 (26%)
AAA 536..669 CDD:278434 47/147 (32%)
Vps4_C <741..783 CDD:286426
TRIP13NP_004228.1 SpoVK <136..360 CDD:223540 64/228 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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