DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and RIX7

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_013066.1 Gene:RIX7 / 850625 SGDID:S000003957 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:642 Identity:246/642 - (38%)
Similarity:376/642 - (58%) Gaps:85/642 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 IKRE--EEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGK 273
            :||:  :|:.|........:||....:||:.|::.||:.||.:|.:.||:||||:|::||||.||
Yeast   188 VKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGK 252

  Fly   274 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRD-K 337
            |.||.|:|.|....|..|:.|.::|.::||||..:|..|:||...:|.::|.||||||.|||| .
Yeast   253 TSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317

  Fly   338 THGEVERRIVSQLLTLMD--GMKKSS--HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 398
            ...|:|||||:||||.||  .|:|::  .:|::.|||||:|:|.||||.|||||||.:.:|:...
Yeast   318 AQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVS 382

  Fly   399 RLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASL------CS------------------- 438
            ||.:|:..:.|:|:...:|..::|..:.|.|||||.:|      |:                   
Yeast   383 RLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPTTAT 447

  Fly   439 ----------------EAALQQIREKMDLIDLE---------DDKIDAEVLASLAVTMENFRYAM 478
                            |::|:.....:|.:.|.         .:.:..|.|:.|::..|:|..|:
Yeast   448 DSSEDNMEIDETANGDESSLKNTANMIDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKAL 512

  Fly   479 TKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPG 543
            ....|:|.||....||:.||.::|.|:.|:.||...:..|::.|:.:.|.|:....|||.:||||
Yeast   513 PTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPG 577

  Fly   544 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKAR 608
            |||||||||:|||.:|||||:||||||..:.||||.::|.:|.:||::.|||:||||||::...|
Yeast   578 CGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR 642

  Fly   609 GGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDK 673
            ..::.:   ::.||:|.:|||:||:..::.:|:||||||||:||||:|||||||:.::|.||:.:
Yeast   643 DTSLSE---SSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTE 704

  Fly   674 SREAILKANLRKS---PLAKEVDLTYIAK--VTQGFSGADLTEICQRACKLAIRQAIEAEIRREK 733
            .:..|:| .|.||   ||:.:||...|.:  ....||||||..:.:.:..||        ::|:.
Yeast   705 EKLDIIK-TLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLA--------LKRKF 760

  Fly   734 ERAENQNSAMDMDEDDPVPE-----------ITSAHFEEAMKFARRSVSDNDIRKYE 779
            .::|...|.:|.|.|....:           :|.:.|..|::..:.||||.|..||:
Yeast   761 FQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKYD 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 246/642 (38%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011 0/1 (0%)
AAA 263..392 CDD:278434 70/133 (53%)
AAA 536..669 CDD:278434 76/132 (58%)
Vps4_C <741..783 CDD:286426 14/50 (28%)
RIX7NP_013066.1 CDC48 <192..824 CDD:273521 244/638 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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