DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and AT3G24530

DIOPT Version :10

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_566752.1 Gene:AT3G24530 / 822048 AraportID:AT3G24530 Length:481 Species:Arabidopsis thaliana


Alignment Length:280 Identity:64/280 - (22%)
Similarity:119/280 - (42%) Gaps:44/280 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 EEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 280
            |:|..|.||..::   :.||.:..:.:.|..|..:|...||.:.|..:...|.||||||::||.:
plant   204 EDELSNIVGLSEL---KTQLRKWAKGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVL 265

  Fly   281 ANETGAFFFL-------INGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--- 335
            .........|       :...:::.:..|.:....|:..:|||   ..|:|:||...:.|.:   
plant   266 GKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAE---GGILFVDEAYRLIPMQKAD 327

  Fly   336 DKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRP-----NSIDPALRRFGRFDREIDIGIPD 395
            ||.:|   ...:.:::::||..|   .:::.|..:.|     .|.:...||..:|....|....:
plant   328 DKDYG---LEALEEIMSVMDTGK---IVVIFAGYSEPMKRVIASNEGFCRRVTKFFNFSDFSAKE 386

  Fly   396 ATGRLEVLRIHTKN---------MKLHDDVDLEQIA----AESHGHVGADLASLCSEAALQQIRE 447
            ..   ::|.|...|         .:||:...|::||    ||:......::.....:..|...||
plant   387 LA---QILHIKMNNQGEDTLFYGFRLHESCTLQEIASLIEAETTEKQRKEMNGGLVDTLLVNARE 448

  Fly   448 KMDLIDLEDDKIDAEVLASL 467
            .:|| .|..:.:|.|.:.::
plant   449 NLDL-RLSFECVDTEEICTI 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 64/280 (23%)
AT3G24530NP_566752.1 ANKYR <17..227 CDD:440430 7/25 (28%)
ANK repeat 51..84 CDD:293786
ANK repeat 86..117 CDD:293786
ANK repeat 119..154 CDD:293786
P-loop containing Nucleoside Triphosphate Hydrolases 191..>398 CDD:476819 48/208 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.