DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and Atad2

DIOPT Version :10

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_081711.2 Gene:Atad2 / 70472 MGIID:1917722 Length:1364 Species:Mus musculus


Alignment Length:901 Identity:224/901 - (24%)
Similarity:360/901 - (39%) Gaps:239/901 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DGDTRDFMRG--YHSEQDEKMKPKDSFDKREDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQA 66
            |.:|.|...|  ..||:.|:.:..|..|:.::         |.      ||.:.|:.....|.|.
Mouse   229 DEETTDNQDGSVESSEEGEEQEDDDGEDEDDE---------DE------EEGEEDNQKRYYLRQR 278

  Fly    67 KMDELQLFRGDTVI----LKGK-RRKETVCIVLSDDTCPDE-KIRMN----------RVVRNNLC 115
            |         .||.    |:.| |.:....:..|....|.. :.|::          |:.|....
Mouse   279 K---------TTVYYQSPLESKPRHQRKPNMFYSGPASPARPRFRLSSTGPRSPYCKRMSRRRHA 334

  Fly   116 VHLSDVVSVQSCPDVKYGKRV---------RILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMG 171
            :|.||..|..|..|..:.:|.         |.||::...:.:.|    ||              .
Mouse   335 IHSSDSTSSSSSEDDCFERRTKRNRNRAINRCLPLNFRKDEIRG----IY--------------K 381

  Fly   172 DNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLA 236
            |...:.|::                         .|.||::.:      .:|.:|.:||....:|
Mouse   382 DRMKIGASL-------------------------ADVDPMQLD------TSVRFDSVGGLSSHIA 415

  Fly   237 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEI 296
            .:||||..||.:|.:|:...::||||.|.||||||||||:|||:|||..     ..||:..|.:.
Mouse   416 ALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADC 480

  Fly   297 MSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSS 361
            :||..||||..||..|::|.:..|||||.||||.:||.|.....::...|||.||.||||:....
Mouse   481 LSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRG 545

  Fly   362 HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHD-DVDLEQIAAES 425
            .::|:.||||.:||||||||.||||||....:||...|.|:|:|||::..... |:.||::|...
Mouse   546 EIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHC 610

  Fly   426 HGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALR--- 487
            .|:.|||:.|:|:||||..:|.:...|....:|:..: |:|:.::.::|..|:.|..|::.|   
Mouse   611 VGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD-LSSITISAKDFEAALQKIRPASQRAVT 674

  Fly   488 ------ETVVE--VPNTTWTDIGGLESV--------KKELQELVQYPVEHPD------------- 523
                  ..:|:  :.||....:..|:.|        .|.|...|..|....|             
Mouse   675 SPGQALSAIVKPLLQNTVHRILDALQKVFPHVEVGTNKSLNSDVSCPFLESDLAYSDDDTPSVYE 739

  Fly   524 ---------KFLKFG----MQPSR---GVLFYGPPGCGKTL-LAKAIANECQA-NFISVKGPELL 570
                     .||...    .||..   .:|..|.||.|::. ||.|:.:..:. ...::..|.|.
Mouse   740 NGLSQKENLNFLHLNRNACYQPMSFRPRLLIVGEPGFGQSSHLAPAVIHALEKFTVYTLDIPVLF 804

  Fly   571 TMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGA 635
            .:.....|.....:..:|:..||.:::...:....:.    ||....|....:.|.:...     
Mouse   805 GISTTSPEEACSQMIREAKRTAPSIVYVPHIHLWWEI----VGPTLKATFTTLLQTIPSF----- 860

  Fly   636 KKNVFIIGATNRPDIIDPAILR---PGRLDQLIYIPLPDDKSR----EAILKANLRKSPLAKEVD 693
             ..|.::..:.:|....|..::   .....::..:.|||.:.|    |.::.....|.|:::   
Mouse   861 -APVLLLATSEKPYSALPEEVQELFTHDYGEIFNVQLPDKEERTKFFEDLILKQASKPPVSQ--- 921

  Fly   694 LTYIAKVTQGFSGADLTEICQRACKLAIRQAIEA---------------EIRREKERAE------ 737
                                    |.|:.||:|.               |::|.:|:.|      
Mouse   922 ------------------------KKAVLQALEVLPVAPPPEPRPLTAEEVKRLEEQEEDTFREL 962

  Fly   738 -----NQNSAMDMD----------EDDPVPEITSAHFEEAMKFARRSVSDNDIRKY 778
                 |....:.:|          :.|.||:..:. .::.|..: ..:|..|:.||
Mouse   963 RIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTV-IKQPMDLS-SVISKIDLHKY 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 214/856 (25%)
Atad2NP_081711.2 RecA-like_Yta7-like 406..575 CDD:410925 85/168 (51%)
AAA_lid_3 603..637 CDD:465537 14/33 (42%)
ycf46 <766..907 CDD:177094 25/150 (17%)
Bromo_AAA 960..1070 CDD:99957 10/59 (17%)

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