Protein Alignment TER94 and Afg2b

DIOPT Version :10

• Sequence 1: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001103117.1
• Gene: Afg2b / 691729
• RGDID: 1595990
• Length: 747
• Species: Rattus norvegicus
• Alignment Length: 694
• Identity: 235/694 - (33%)
• Similarity: 374/694 - (53%)
• Gaps: 85/694 - (12%)

  Fly   126 SCPDVKYGKRVRILPIDESTEGVTGN--LFEIYLKPYFLEAYRPIHMGDNFIVRAAM-RPIEFKV 187
            |||.:   :|:.:.|:.....|...:  :.|:..:   |...||:..|........: .|:....
  Rat    99 SCPPL---RRLEVWPVLRPQAGAPSSDAVLEVSQE---LLRNRPVSRGHVVATPPGIPGPVAALH 157

  Fly   188 VLT---DPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHP 249
            |::   ||||...|.|.|.|.....|..:.|..      |...:||..:....::|::.|||.:|
  Rat   158 VVSGTPDPEPAGRVTPHTRITLSDKPPPQVEPP------GEVTLGGLSETADSLRELLRLPLCYP 216

  Fly   250 SLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 314
            ....|:|:..|||:|:.||||.|||.:.||||.|.||....::.|.:.....||:|.|:|:.|:.
  Rat   217 LALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQR 281

  Fly   315 AEK---NSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSID 376
            |::   ..|:::|:||:||:.|:|.......|.|:|:|:|||:||:.....::|:.|||||:.:|
  Rat   282 AQELASRGPSLLFLDEVDALCPRRGGPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELD 346

  Fly   377 PALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAA 441
            |||||.||||||:.||.|....|..:|.:.|..|.:...:||..:|..:.|:|||||.:||.|||
  Rat   347 PALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAA 411

  Fly   442 LQQI--REKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETV--VEVPNTTWTDIG 502
            ...:  .||    :..:.||:.          .:|..|..|..||:.|.::  .::....|..||
  Rat   412 TCALLKNEK----NQNNPKIEE----------TDFLEAFKKVQPSSFRSSIGLTDIRPVGWEQIG 462

  Fly   503 GLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 567
            |||.||.:|::.|::|::.|.:|.:.|:...:|:|.||||||.||.|.:|:|..|..:|:||.|.
  Rat   463 GLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGA 527

  Fly   568 ELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAG-GAADRVINQILTEMD 631
            :|.:.:.|:||..:..:|.:||:..|.::|.||:||:..:|  :||.:| .|.:||::.:|.|:|
  Rat   528 DLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSR--SVGSSGCDARERVLSVLLNELD 590

  Fly   632 GMGAK-------------------KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREA 677
            |:|.:                   ::|.|:.||||||::|.|:|||||||:::|:|.||.:.|.:
  Rat   591 GVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLS 655

  Fly   678 ILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSA 742
            |||......|:...|.|..:|..|..||||||..:|:.|...|::              ||...|
  Rat   656 ILKVCTNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFALQ--------------ENGLEA 706

  Fly   743 MDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYE-MFAQTL 785
            ..::::         ||.||:|..:.|::..|:..|| :|.:.|
  Rat   707 TTVEQE---------HFTEALKTVKPSLTLKDLTFYENLFKKEL 741

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	235/694 (34%)
Afg2b	NP_001103117.1	CDC48	14..738	CDD:273521	233/689 (34%)