Protein Alignment TER94 and Atad2b

DIOPT Version :10

• Sequence 1: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: XP_038969041.1
• Gene: Atad2b / 500625
• RGDID: 1566199
• Length: 1555
• Species: Rattus norvegicus
• Alignment Length: 809
• Identity: 207/809 - (25%)
• Similarity: 342/809 - (42%)
• Gaps: 187/809 - (23%)

  Fly    15 HSEQDEKMKPKDSFDKREDLATAILKRKDRPNRLIVEEAQNDDNS-VVSLSQAKMDELQLFRGDT 78
            |.|...:.:.::|.::..|:.              ||||:.::|. ..:|.|.|  .:..::...
  Rat   248 HHEVSTEGEEEESQEEDGDIE--------------VEEAEGEENDRPYNLRQRK--TVDRYQAPP 296

  Fly    79 VILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRV------- 136
            ::...::::|.....:.....     |.:.:.|....:|.||..   |..:.::.:|.
  Rat   297 IVPAHQKKRENTLFDIHRSPA-----RRSHIRRKKHAIHSSDTT---SSDEERFERRKSKSMARA 353

  Fly   137 --RILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVA 199
              |.||::...|.:...:....:|                 |.|::
  Rat   354 RNRCLPMNFRAEDLASGILRERVK-----------------VGASL------------------- 382

  Fly   200 PETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL 264
                  .|.||:..::      :|.:|.|||....:..:||||..||.:|.:|:...::||||.|
  Rat   383 ------ADVDPMNIDK------SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCL 435

  Fly   265 MYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIF 324
            .||||||||||:|||:|||..     ..||:..|.:.:||..||||..||..|::|....|:|||
  Rat   436 FYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIF 500

  Fly   325 IDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREI 389
            .||||.:||.|.....::...|||.||.||||:.....::|:.||||.:||||||||.||||||.
  Rat   501 FDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 565

  Fly   390 DIGIPDATGRLEVLRIHTK--NMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLI 452
            ...:||...|..:|:|||:  |.|| .|..|.::|.:..|:.|||:.:||:||||..:|.:...|
  Rat   566 LFNLPDQRARKHILQIHTRDWNPKL-SDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQI 629

  Fly   453 DLEDDKIDAEVLASLAVTMENFRYAM----------TKSSPSALRETVVEVPNTTWTDIGGL--- 504
            .....|:..:| :|:.::.::|..||          ..||..||...:..:...::.:|..:
  Rat   630 YASSHKLQLDV-SSIVLSAQDFYRAMQNIVPASQRAVMSSGQALSPIIRPLLERSFNNILAVLQK 693

  Fly   505 --------ESVKKE-LQELV------------------------QYPVEHPDKFLKFGMQPSR-- 534
                    :|.||| ::.|:                        ..|......:|.|.|.|..
  Rat   694 IFPHAEISQSDKKEDVENLILDDSEDENALSIFEMSCHSASPKKSSPAAVTKPYLHFTMSPYHQP 758

  Fly   535 -----GVLFYGPPGCGKTL-LAKAIANECQANFISVKG---PELLTMWFGESEANVRDIFDKARS 590
                 .:|..|..|.|:|. ||.|:.:..:.  .||..   |.|.::.....|.:...||.:||.
  Rat   759 TSYRPRLLLSGERGSGQTSHLAPALLHTLER--FSVHRLDLPALYSVSAKTPEESCAQIFREARR 821

  Fly   591 AAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN-QILTEMDGMGAKKNVFIIGATNR-----PD 649
            ..|.:::..           ::||...|....:. ..||.:..:.:...:|::..:..     |:
  Rat   822 TVPSIVYMP-----------HIGDWWDAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPE 875

  Fly   650 IIDPAILRPGRLDQLIYI--PLPDDKSR---EAILKANLRKSPLAKEVDLTYIAKVTQGFSGADL 709
            .: ..|.|. :.::::|:  |:.:|:.:   |.||.......|..|...|..:
  Rat   876 EV-KCIFRI-QYEEVLYVQRPIEEDRRKFFQELILHQASMAPPRRKHTALRAM------------ 926

  Fly   710 TEICQRACKLAIRQAIEAEIRREKERAEN 738
             |:...|.....||..|:|..|.:::.||
  Rat   927 -EVLPLALPCPPRQLSESEKSRMEDQEEN 954

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	203/777 (26%)
Atad2b	XP_038969041.1	RecA-like_Yta7-like	398..567	CDD:410925	84/168 (50%)
		AAA_lid_3	592..632	CDD:465537	15/39 (38%)
		P-loop containing Nucleoside Triphosphate Hydrolases	755..891	CDD:476819	27/150 (18%)
		Bromo_AAA	956..1067	CDD:99957