DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and NSF

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_006169.2 Gene:NSF / 4905 HGNCID:8016 Length:744 Species:Homo sapiens


Alignment Length:556 Identity:168/556 - (30%)
Similarity:263/556 - (47%) Gaps:112/556 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 EEESLNAVGYD-------------------DIGGCRKQLAQI-KEMVELPLRHPSLFKAIGVKPP 260
            |..|||.:|..                   .|||..|:.:.| :......:..|.:.:.:|.|..
Human   189 ENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHV 253

  Fly   261 RGILMYGPPGTGKTLIARAV-----ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK--- 317
            :|||:|||||.||||:||.:     |.|..    ::|||||::|..||||:|:||.|.:||:   
Human   254 KGILLYGPPGCGKTLLARQIGKMLNAREPK----VVNGPEILNKYVGESEANIRKLFADAEEEQR 314

  Fly   318 ----NSPA-IIFIDEIDAIAPKRDKTHGE--VERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSI 375
                ||.. ||..||||||..:|....|.  |...:|:|||:.:||:::.::::|:..||||:.|
Human   315 RLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLI 379

  Fly   376 DPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHD----DVDLEQIAAESHGHVGADLASL 436
            |.||.|.||.:.:::||:||..|||::|.|||..|:.|.    |||::::|.|:....||:|..|
Human   380 DEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444

  Fly   437 C----SEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTT 497
            .    |.|..:.|:....:      ::|.|...||.||..:|.        ::|...:.....|.
Human   445 VRAAQSTAMNRHIKASTKV------EVDMEKAESLQVTRGDFL--------ASLENDIKPAFGTN 495

  Fly   498 WTD-----IGGL----ESVKKELQ--ELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAK 551
            ..|     :.|:    :.|.:.|.  ||:....::.|:      .|...||..|||..|||.||.
Human   496 QEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDR------TPLVSVLLEGPPHSGKTALAA 554

  Fly   552 AIANECQANFISVKGPELLTMWFGESEA----NVRDIFDKA-RSAAPCVLFFDELDSIAKARGGN 611
            .||.|....||.:..|:.:   .|.||.    .::.|||.| :|...||: .|:::.:.      
Human   555 KIAEESNFPFIKICSPDKM---IGFSETAKCQAMKKIFDDAYKSQLSCVV-VDDIERLL------ 609

  Fly   612 VGDAGGAADRVINQILTEMDGMGAK-----KNVFIIGATNRPDIIDPAILRPGRLDQL----IYI 667
              |......|..|.:|..:..:..|     :.:.|||.|:|.|::.       .::.|    ..|
Human   610 --DYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQ-------EMEMLNAFSTTI 665

  Fly   668 PLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQG 703
            .:|:..:.|.:|:| |......|:.:.|.||:..:|
Human   666 HVPNIATGEQLLEA-LELLGNFKDKERTTIAQQVKG 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 168/556 (30%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434 62/143 (43%)
AAA 536..669 CDD:278434 40/146 (27%)
Vps4_C <741..783 CDD:286426
NSFNP_006169.2 CDC48_N 6..83 CDD:215012
CDC48_2 111..>159 CDD:308534
SpoVK <142..490 CDD:223540 109/318 (34%)
AAA 538..670 CDD:214640 41/150 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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