DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and Nsf2

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster


Alignment Length:688 Identity:184/688 - (26%)
Similarity:292/688 - (42%) Gaps:177/688 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 CPDEKIRMNRVVRNNLCVHLSD------VVSVQSCPDVKY------------------------- 132
            ||.:::.:.    |...|::||      .|.:...|.:.|                         
  Fly    14 CPTDELSLT----NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRK 74

  Fly   133 ------GKRVRILP--IDESTEGVTGNLFE---IYLKPYFLEAYRPIHMGDNFIVRAAMRPI--- 183
                  .:.:.:.|  .|.|.:.:|...||   :..|....|.|....|...|:::.|..|:   
  Fly    75 WATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTVG 139

  Fly   184 -----EFK-----------VVLTDPEPYCIVAPET--VIF--CDGDPIKREEEEES--LNAVG-- 224
                 :||           :...||.......|:|  |.|  ..|:.:.:.|:.|:  ||..|  
  Fly   140 QTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRS 204

  Fly   225 -------------YD----DIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 271
                         :|    .|||..|:. |..:......:..|.|.:.:|:|..:|||:||||||
  Fly   205 KGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGT 269

  Fly   272 GKTLIARAV-----ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPA--------II 323
            ||||:||.:     |.|..    ::|||:|:.|..||||:|:|:.|.|||:....        ||
  Fly   270 GKTLMARQIGTMLNAREPK----IVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHII 330

  Fly   324 FIDEIDAIAPKRDKTHGE--VERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFD 386
            ..||||||...|....|.  |...:|:|||..:||:::.::::|:..|||.:.||.||.|.||.:
  Fly   331 IFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLE 395

  Fly   387 REIDIGIPDATGRLEVLRIHTKNM----KLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 447
            .:::|.:|:..||:::|.||||.|    |:..|||..:|||::....||:|..|...|.    ..
  Fly   396 VQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQ----ST 456

  Fly   448 KMDLIDLEDDK--IDAEVLASLAVTMENFRYAM---TKSSPSALRETVVEV---------PNTTW 498
            .|:.:...|.|  :|.|.:..|.||..:|.:|:   .|.:..|.:|.:..:         |..|.
  Fly   457 AMNRLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTE 521

  Fly   499 TDIGGLESVKK----ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 559
            ....|:.||::    |...||                   .||..|.|..||:.||..:|.....
  Fly   522 LLEDGMLSVQQAKATESSGLV-------------------SVLIEGAPNSGKSALAANLAQLSDF 567

  Fly   560 NFISVKGPELLTMWFGESE--ANVRDIFDKA-RSAAPCVLFFDELDSIAKARGGNVGDAGGAADR 621
            .|:.|..||.: :.|.||.  .::|.|||.| ||...|::    :|::.:     :.|.|....|
  Fly   568 PFVKVCSPEDM-VGFTESAKCLHIRKIFDDAYRSTLSCIV----VDNVER-----LLDYGPIGPR 622

  Fly   622 VIN-------QILTEMDGMGAKKNVFIIGATNRPDIID 652
            ..|       .:|.:....|.|  :.|:..::|.|:::
  Fly   623 YSNLTLQALLVLLKKQPPKGRK--LLILCTSSRRDVLE 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 184/688 (27%)
CDC48_N 47..129 CDD:280513 7/35 (20%)
CDC48_2 153..213 CDD:215011 18/85 (21%)
AAA 263..392 CDD:278434 59/143 (41%)
AAA 536..669 CDD:278434 35/127 (28%)
Vps4_C <741..783 CDD:286426
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 9/78 (12%)
CDC48_2 117..>170 CDD:215011 9/52 (17%)
AAA 259..404 CDD:214640 61/148 (41%)
AAA 261..402 CDD:278434 60/144 (42%)
AAA 543..674 CDD:214640 35/128 (27%)
P-loop_NTPase 544..>613 CDD:304359 25/78 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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