Protein Alignment TER94 and Nsf2

DIOPT Version :10

• Sequence 1: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Alignment Length: 688
• Identity: 184/688 - (26%)
• Similarity: 292/688 - (42%)
• Gaps: 177/688 - (25%)

  Fly    99 CPDEKIRMNRVVRNNLCVHLSD------VVSVQSCPDVKY------------------------- 132
            ||.:::.:.    |...|::||      .|.:...|.:.|
  Fly    14 CPTDELSLT----NKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQRK 74

  Fly   133 ------GKRVRILP--IDESTEGVTGNLFE---IYLKPYFLEAYRPIHMGDNFIVRAAMRPI--- 183
                  .:.:.:.|  .|.|.:.:|...||   :..|....|.|....|...|:::.|..|:
  Fly    75 WATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLTVG 139

  Fly   184 -----EFK-----------VVLTDPEPYCIVAPET--VIF--CDGDPIKREEEEES--LNAVG-- 224
                 :||           :...||.......|:|  |.|  ..|:.:.:.|:.|:  ||..|
  Fly   140 QTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRILGNTVVQFEKAENSVLNLQGRS 204

  Fly   225 -------------YD----DIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 271
                         :|    .|||..|:. |..:......:..|.|.:.:|:|..:|||:||||||
  Fly   205 KGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGT 269

  Fly   272 GKTLIARAV-----ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPA--------II 323
            ||||:||.:     |.|..    ::|||:|:.|..||||:|:|:.|.|||:....        ||
  Fly   270 GKTLMARQIGTMLNAREPK----IVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHII 330

  Fly   324 FIDEIDAIAPKRDKTHGE--VERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFD 386
            ..||||||...|....|.  |...:|:|||..:||:::.::::|:..|||.:.||.||.|.||.:
  Fly   331 IFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLE 395

  Fly   387 REIDIGIPDATGRLEVLRIHTKNM----KLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 447
            .:::|.:|:..||:::|.||||.|    |:..|||..:|||::....||:|..|...|.    ..
  Fly   396 VQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQ----ST 456

  Fly   448 KMDLIDLEDDK--IDAEVLASLAVTMENFRYAM---TKSSPSALRETVVEV---------PNTTW 498
            .|:.:...|.|  :|.|.:..|.||..:|.:|:   .|.:..|.:|.:..:         |..|.
  Fly   457 AMNRLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTE 521

  Fly   499 TDIGGLESVKK----ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 559
            ....|:.||::    |...||                   .||..|.|..||:.||..:|.....
  Fly   522 LLEDGMLSVQQAKATESSGLV-------------------SVLIEGAPNSGKSALAANLAQLSDF 567

  Fly   560 NFISVKGPELLTMWFGESE--ANVRDIFDKA-RSAAPCVLFFDELDSIAKARGGNVGDAGGAADR 621
            .|:.|..||.: :.|.||.  .::|.|||.| ||...|::    :|::.:     :.|.|....|
  Fly   568 PFVKVCSPEDM-VGFTESAKCLHIRKIFDDAYRSTLSCIV----VDNVER-----LLDYGPIGPR 622

  Fly   622 VIN-------QILTEMDGMGAKKNVFIIGATNRPDIID 652
            ..|       .:|.:....|.|  :.|:..::|.|:::
  Fly   623 YSNLTLQALLVLLKKQPPKGRK--LLILCTSSRRDVLE 658

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	184/688 (27%)
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012	9/78 (12%)
		CDC48_2	117..>170	CDD:215011	9/52 (17%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	69/179 (39%)
		CDC48	<225..>611	CDD:273521	137/417 (33%)