DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment TER94 and pch2

DIOPT Version :9

Sequence 1:	NP_001097249.1	Gene:	TER94 / 36040	FlyBaseID:	FBgn0286784	Length:	826	Species:	Drosophila melanogaster
Sequence 2:	NP_001287235.1	Gene:	pch2 / 41013	FlyBaseID:	FBgn0051453	Length:	421	Species:	Drosophila melanogaster

Alignment Length:	245	Identity:	68/245 - (27%)
Similarity:	107/245 - (43%)	Gaps:	46/245 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   511 LQELVQYPVEHPDKFLKFGMQP---------------SRGVLFYGPPGCGKTLLAKAIANE---- 556
            |.|.:.|.....:|.|||.:..               :|.:|.:||||.|||.|.||:|.:
  Fly   129 LWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIR 193

  Fly   557 -----CQANFISVKGPELLTMWFGESEANVRDIFDKARSAAP------CVLFFDELDSIAKARGG 610
                 ...:.:.:....|.:.||.||...|..:|:|......      ||| .||::|:|.||..
  Fly   194 TQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVL-IDEVESLAYARSA 257

  Fly   611 NVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKS- 674
            ...:....|.||:|.:||::|.:....||.|:..:|....||.|.:  .|.|..::|..|...:
  Fly   258 MSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAFV--DRADIRLFIGYPGISAI 320

  Fly   675 RE------------AILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEI 712
            ||            .:|:..:.:|..|:|..||.:|:.:.|.||..|.::
  Fly   321 REIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKL 370

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	68/245 (28%)
		CDC48_N	47..129	CDD:280513
		CDC48_2	153..213	CDD:215011
		AAA	263..392	CDD:278434
		AAA	536..669	CDD:278434	46/147 (31%)
		Vps4_C	<741..783	CDD:286426
pch2	NP_001287235.1	AAA	166..315	CDD:214640	47/151 (31%)
pch2	NP_001287235.1	AAA	169..314	CDD:278434	46/147 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810