DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and spast

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_998080.2 Gene:spast / 405851 ZFINID:ZDB-GENE-040426-2331 Length:570 Species:Danio rerio


Alignment Length:567 Identity:156/567 - (27%)
Similarity:258/567 - (45%) Gaps:93/567 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 GPPGTGKTLIARAVAN-ETGAFFFLINGPEIMSKLAGESESNL---RKAFEEAEKNSPAIIFIDE 327
            ||.|:.:|  ...:.| ...||.|:....:|.....|:.:..:   ||...|.||....     :
Zfish    69 GPDGSEET--GERIRNYHKQAFEFISVALQIDEDEKGDKQKAVQWYRKGIAELEKGIQI-----Q 126

  Fly   328 IDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIG 392
            :.....|.|:.. :::.::::.|....|.:|...:|:..:...  :|.|.:...|          
Zfish   127 VTGAGEKADRAR-KLQDKMITNLSMAEDRLKLLGNLLSQSPAE--SSSDDSFYSF---------- 178

  Fly   393 IPDATGRLEVLRIHTKNMKLHDDVDL---EQIAAESHGHVGADLASL-CSEAALQQIR------E 447
               :.|.|..........|..|.:.:   ..:..::......:.:.| |:.:|.|..|      :
Zfish   179 ---SNGNLRPAPASGAVSKKKDTLTITNQTSLRPKNPPKSTPNASGLNCTPSAAQSSRTGPQNNQ 240

  Fly   448 KMDLIDLEDDKIDAEVLASLAVT--------MENFRYAMTKSSPSALRETVVEVPNTTWTDIGGL 504
            |...:     |....|.||...|        |:||:...:|.:...|.|.|.......:.||.|.
Zfish   241 KGPTV-----KGKNNVKASTTATASPQRKRDMKNFKNVDSKLASLILNEIVDSGSVVRFDDIAGQ 300

  Fly   505 ESVKKELQELVQYPVEHPDKFLKFGMQ-PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 568
            :..|:.|||:|..|...|:.|.  |:: |:||:|.:||||.|||:||||:|.|..|.|.::....
Zfish   301 DLAKQALQEIVILPALRPELFT--GLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAAT 363

  Fly   569 LLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGM 633
            |.:.:.||.|..||.:|..||...|.::|.||:||:...|.....|   |:.|:..:.|.|.||:
Zfish   364 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHD---ASRRLKTEFLIEFDGV 425

  Fly   634 --GAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRK--SPLAKEVDL 694
              |..:.|.::||||||..:|.|:||  |..:.||:.||.:::|..:||..|.|  :||::: :|
Zfish   426 QSGGDERVLVMGATNRPQELDEAVLR--RFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQK-EL 487

  Fly   695 TYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHF 759
            :.:|::|.|:||:|||.:.:.|....||     |::.|:.|..:.:...|:...|         |
Zfish   488 SQLARLTDGYSGSDLTSLAKDAALGPIR-----ELKPEQVRNMSAHEMRDIRISD---------F 538

  Fly   760 EEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSG 806
            .|::|..:||||          .|||.      |..|:..:.|:|:|
Zfish   539 LESLKRIKRSVS----------PQTLD------QYVRWNREYGDTTG 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 151/546 (28%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434 24/128 (19%)
AAA 536..669 CDD:278434 54/134 (40%)
Vps4_C <741..783 CDD:286426 9/41 (22%)
spastNP_998080.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..269 14/87 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.