DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and trip13

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_012819902.1 Gene:trip13 / 394836 XenbaseID:XB-GENE-974898 Length:440 Species:Xenopus tropicalis


Alignment Length:300 Identity:70/300 - (23%)
Similarity:113/300 - (37%) Gaps:63/300 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 WTDIGGLESVKKELQELVQYPVEHPDKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANEC---- 557
            |..:.....:|..|.:.::..:...||.:...: ..:|.||.:||||.|||.|.||:|.:.    
 Frog   144 WDSLIYDSEIKSRLLDYIETAMLFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIRL 208

  Fly   558 -----QANFISVKGPELLTMWFGESEANVRDIFDKAR-----SAAPCVLFFDELDSIAKAR-GGN 611
                 ....:.:....|.:.||.||...|..:|.|..     ..|...:..||::|:..|| ...
 Frog   209 SYRYRYGQLVEINSHSLFSKWFSESGKLVTKMFQKIHELINDKEALVFVLIDEVESLTAARKASR 273

  Fly   612 VGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP------ 670
            .|.....|.||:|.:||::|.:....||.|:..:|..:.||.|......:.|.|..|.|      
 Frog   274 AGTEPSDAIRVVNAVLTQIDHIKRYPNVVILSTSNLTEKIDVAFTDRADIKQYIGPPSPAAIFKI 338

  Fly   671 -----------------------DDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEI 712
                                   .|......|:.|:.|..|    .|..|::.::|.||..|.::
 Frog   339 YLSCIEELMKCQIIYPKQQLLTLRDLEIIGFLENNISKLSL----QLNEISRKSEGLSGRVLRKL 399

  Fly   713 CQRACKL--------------AIRQAIEAEIRREKERAEN 738
            ...|..|              |:..|::.:.:..|..:||
 Frog   400 PFLAHALYLQSPTVTIERFLWALSLAVDEQFQERKNFSEN 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 69/299 (23%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434
AAA 536..669 CDD:278434 44/147 (30%)
Vps4_C <741..783 CDD:286426
trip13XP_012819902.1 SpoVK <144..394 CDD:223540 61/253 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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