Protein Alignment TER94 and smid

DIOPT Version :10

• Sequence 1: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Alignment Length: 926
• Identity: 288/926 - (31%)
• Similarity: 429/926 - (46%)
• Gaps: 250/926 - (26%)

  Fly     9 DFMRGYHSEQDEKMKPK--------DSFDKREDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQ 65
            :.|...:|:..:.:.||        .|.|:.||.:..              :..|.|.  |:.:.
  Fly    97 NMMNSLYSQPRKPLAPKPISEPIDISSGDENEDDSNT--------------KTTNGDG--VAAAA 145

  Fly    66 AKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDV 130
            |........:|..:    ||..|.|         |:..:...:|.:.| .:|:|...::|....|
  Fly   146 APPPPTPAVQGSAL----KRLMEEV---------PEIAVAAKKVAKPN-TIHVSSSEAIQKLHQV 196

  Fly   131 KYGKRVRIL-----PIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLT 190
             .|.|.:.|     |..:....|.|             .|:.:|...:   |..:|  :||..|.
  Fly   197 -VGNRAKNLSEDAVPRSKDHRNVPG-------------LYQQLHQNQS---RDRLR--KFKRDLE 242

  Fly   191 DPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAI 255
            ...|                      .||     :.||||....|.::.||: :.::.|..:..:
  Fly   243 VQHP----------------------TES-----FRDIGGMDSTLKELCEML-IHIKSPEFYFQL 279

  Fly   256 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSP 320
            |:.|.||:|::||||.|||.:|||::.:.......|...|::..::||||..:|:.|::|...||
  Fly   280 GLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSP 344

  Fly   321 AIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKS---SHLIVMAATNRPNSIDPALRRF 382
            .::||||||||...|.....::||||||||::.:|.:|.:   ..::|:|||.||:.:||.|||.
  Fly   345 CVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRI 409

  Fly   383 GRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAA------ 441
            ||||.||.|.||....|.|:|||..:.:.:...::.::||..:.|:|||||.:|.|.||
  Fly   410 GRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKR 474

  Fly   442 --LQQIRE-------KMDLIDLEDD---------------------------KIDAE-------- 462
              :::.||       .|..:.|:||                           |:|.:
  Fly   475 RSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSAKDK 539

  Fly   463 ----------------------------------------------------------------- 462
                                                                             
  Fly   540 SEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSSND 604

  Fly   463 -----VLASL----------------AVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLES 506
                 .||.|                .:|:.:|..|:....|||.||..:.||:|||.|||.||.
  Fly   605 EYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEK 669

  Fly   507 VKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 571
            :::||:..|..||::|:...:.|:....|||..|||||||||||||||||...||||||||||:.
  Fly   670 IREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMN 734

  Fly   572 MWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAK 636
            |:.||||..||..|.:||::||||:||||.||:...|... ||...:..|::||:||||||:..:
  Fly   735 MYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDG-GDGNNSGTRIVNQLLTEMDGVEER 798

  Fly   637 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKA---NLRKSPLAKEVDLTYIA 698
            |.|:|:.|||||||||||||||||||.::|:..|:...|..||||   |.::..||.:|||..||
  Fly   799 KGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIA 863

  Fly   699 KVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAM 763
            ..|:|::||||..:.::|...::||::              |:. |.:.||..  :.|.||:||:
  Fly   864 AQTEGYTGADLAGLVKQASMFSLRQSL--------------NNG-DTNLDDLC--VRSQHFQEAL 911

  Fly   764 KFARRSVSDNDIRKYE 779
            :..|.||::.|.:.|:
  Fly   912 QQLRPSVNEQDRKIYD 927

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	280/880 (32%)
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:465247
		CDC48	<242..933	CDD:273521	251/732 (34%)