DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and Pex6

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster


Alignment Length:918 Identity:246/918 - (26%)
Similarity:400/918 - (43%) Gaps:206/918 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GDTRDFMRGYHSEQDEKMKPK------------------DSFDKREDLATAILKRKDRPNR---L 48
            |..::.:.||:| ..:.:.||                  ..:.|.:.|.|.|      |||   |
  Fly    35 GRVQELVEGYNS-AIQLLAPKWPWFLYPGYLTYAVYWRYAKYYKGKFLLTPI------PNRLYDL 92

  Fly    49 IVEEAQNDDNSVVSLSQ------AKMDELQLFRGDTVILKGKRRK-------------ETV---- 90
            :::..|.....:|..||      |:..::...   .::::|:|.:             :||    
  Fly    93 LIKNEQIKSEHLVFASQEVYENYAESPDVNFV---NLVIRGRRVRIGKPLASDEGNMTQTVIKQM 154

  Fly    91 ---------------------CIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGK 134
                                 |:.:.::...:...|..  :|:|..|.:......|:.|.:  ..
  Fly   155 LQEAPHTIVAQILPAAQCQPNCLYVQENFYGNILDRFQ--IRSNCWVQVEHFADEQTIPGI--AT 215

  Fly   135 RVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDN------------------FIVRAAMR 181
            :..:..:.:..| :...|.|:.|..|| ...|.:|.|..                  :::.|.:|
  Fly   216 KAHVYLVADPHE-LPAELTEVILSNYF-NTPRLMHRGHTYRIEVNAELVGTATYAHYYLIFAHLR 278

  Fly   182 PIEFKVVLTDP-----EPYCIVA---------PETVIFCDGDPIKREEEEESLNAVGYDDIGGCR 232
            .:..|.:..:.     |...|||         |.:..|     :.|:..:.......|.  .|.|
  Fly   279 HVHLKCIHLETKGSEFELQAIVAKNFSNLVQVPASHSF-----LPRQVLDSMAIVENYP--SGLR 336

  Fly   233 KQLAQIKEMVE--LPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPE 295
            |....::..|:  ||.:...| .:..:.|.  .|:.|..|:||:.:..|||.|.|...:..:..|
  Fly   337 KPYKLLRSSVDAFLPKKSACL-SSKHIFPV--FLLQGERGSGKSKLVSAVAQELGMHIYGADCAE 398

  Fly   296 IMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVS----QLLTLMDG 356
            |:|::...:|..|:..|.:::...|.:|.....:......:   |..:.|::|    |:..|.:.
  Fly   399 IVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIFGIDNE---GNEDLRLLSAFHVQVQELFNR 460

  Fly   357 MKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR-IHTK--------NMKL 412
            .:|  |.||:.|......:.|.::  |.|...|:|.:|....|.|:|| :|.:        |.|.
  Fly   461 DRK--HPIVVVALTSDRHLKPMIQ--GLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKA 521

  Fly   413 HDDVD------------------------LEQIAAESHGHVGADLASLCSEAALQQIREKMDLID 453
            .:.:.                        |:.:||:|.|.:..||..|...|...:||.::....
  Fly   522 IEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTT 586

  Fly   454 LEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYP 518
            |     |....|.....|:: .:|.:..:|        :||...|:|||||..:|.|:|..:..|
  Fly   587 L-----DMSHFAKNLTDMQS-SFADSLGAP--------KVPKVYWSDIGGLAKLKDEIQSSIGLP 637

  Fly   519 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRD 583
            ::|.....| .::.| |:|.|||||.||||:|||:|.||..:|:||:|||||.|:.|:||.|||:
  Fly   638 LKHVHLMGK-NLRRS-GILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVRE 700

  Fly   584 IFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMG---AKKNVFIIGAT 645
            :|.:||||||||||.|||||:|..| |..||:||..|||::|:|.|||||.   ..|.:||:.||
  Fly   701 VFSRARSAAPCVLFLDELDSLAPNR-GVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAAT 764

  Fly   646 NRPDIIDPAILRPGRLDQLIYI-PLPDDKSREAILKANLRKSPLAKEVDLTYIA-KVTQGFSGAD 708
            ||||:||||:|||||.|:|.|: |....:.:.|:|:|..::..|...||:..|| ::....||||
  Fly   765 NRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGAD 829

  Fly   709 LTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARR---SV 770
            |..||..|...|:|:.|:..:            :..:.|.:.|||......|:..|...:   |:
  Fly   830 LYSICSNAWLSAVRRTIDGHL------------SGTISEKELVPENVIVQEEDFTKSFNKFVPSI 882

  Fly   771 SDNDIRKY 778
            |..|:..:
  Fly   883 SAKDLEYF 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 234/858 (27%)
CDC48_N 47..129 CDD:280513 17/128 (13%)
CDC48_2 153..213 CDD:215011 16/91 (18%)
AAA 263..392 CDD:278434 32/132 (24%)
AAA 536..669 CDD:278434 85/136 (63%)
Vps4_C <741..783 CDD:286426 9/41 (22%)
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 178/503 (35%)
P-loop_NTPase 367..492 CDD:304359 32/131 (24%)
AAA 653..787 CDD:278434 85/134 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445206
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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