DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and nsfa

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_021325418.1 Gene:nsfa / 368483 ZFINID:ZDB-GENE-030616-37 Length:747 Species:Danio rerio


Alignment Length:516 Identity:153/516 - (29%)
Similarity:245/516 - (47%) Gaps:101/516 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 IVAPETVIFCDGDPIKREEEEESLNAVGYD-------------------DIGGCRKQLAQI-KEM 241
            :|....|||       .:.|..||..||..                   .|||..|:.:.| :..
Zfish   177 LVGNSQVIF-------EKSESSSLTLVGKAKTKEARQTIINPDWNFEKMGIGGLDKEFSDIFRRA 234

  Fly   242 VELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV-----ANETGAFFFLINGPEIMSKLA 301
            ....:..|.:.:.:|.|..:|||::||||.||||:||.:     |.|..    ::|||||::|..
Zfish   235 FASRVFPPDIVEQMGCKHVKGILLFGPPGCGKTLMARQIGKMLNAREPK----IVNGPEILNKYV 295

  Fly   302 GESESNLRKAFEEAEKNSPA--------IIFIDEIDAIAPKR--DKTHGEVERRIVSQLLTLMDG 356
            ||||:|:||.|.:||:....        ||..||:|||..:|  ..:...|...:|:|||:.:||
Zfish   296 GESEANIRKLFADAEEEQKRLGANSGLHIIIFDELDAICKQRGTGASSTGVHDTVVNQLLSKIDG 360

  Fly   357 MKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMK----LHDDVD 417
            :::.::::|:..||||:.||.||.|.|||:.:::||:||..||:::|.|||..|:    |..|||
Zfish   361 VEQLNNILVIGMTNRPDLIDEALMRPGRFEVKMEIGLPDEKGRVQILNIHTAKMREFKLLASDVD 425

  Fly   418 LEQIAAESHGHVGADLASLC----SEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAM 478
            ::::|||:..:.||:|..|.    |.|..:.|:....:      ::|.|....|.||..:|..::
Zfish   426 VKELAAETKNYSGAELEGLVRAAQSTAMNRHIKATSTV------EVDMERAEKLQVTRTDFMASL 484

  Fly   479 TKSSPSALRETVVEVPN------TTWTDIGGLESVKKELQ--ELVQYPVEHPDKFLKFGMQPSRG 535
            ......|......:..:      ..|.|     .|.:.|:  ||:....::.|:      .|...
Zfish   485 NNDIKPAFGTNQEDYSSYIMNGIIKWGD-----PVTRVLEDGELLVQQTKNSDR------TPLVS 538

  Fly   536 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN----VRDIFDKA-RSAAPCV 595
            ||..|||..|||.||..|:.:.|..||.:..|:.:   .|.||.:    ::.|||.| :|...||
Zfish   539 VLLEGPPHSGKTALAAKISEDSQFPFIKICSPDKM---IGHSEISKCQAIKKIFDDAYKSQLSCV 600

  Fly   596 LFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAK-----KNVFIIGATNRPDII 651
            : .|:::.:.        |......|..|.:|..:..:..|     :.:.|||.|:|.|::
Zfish   601 V-VDDIERLL--------DYVPIGPRFSNLVLQALLVLLKKTPPHGRKLLIIGTTSRKDVL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 153/516 (30%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011 4/15 (27%)
AAA 263..392 CDD:278434 58/143 (41%)
AAA 536..669 CDD:278434 37/126 (29%)
Vps4_C <741..783 CDD:286426
nsfaXP_021325418.1 CDC48_N 6..83 CDD:215012
CDC48_2 111..183 CDD:215011 1/5 (20%)
TIP49 160..>606 CDD:332389 142/460 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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