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Protein Alignment TER94 and Nvl

DIOPT Version :9

Sequence 1:	NP_001097249.1	Gene:	TER94 / 36040	FlyBaseID:	FBgn0286784	Length:	826	Species:	Drosophila melanogaster
Sequence 2:	NP_001099450.1	Gene:	Nvl / 289323	RGDID:	1311270	Length:	855	Species:	Rattus norvegicus

Alignment Length:	625	Identity:	260/625 - (41%)
Similarity:	375/625 - (60%)	Gaps:	68/625 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   212 KREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLI 276
            |.:..|..:::|.::|:||....|.::.:|: :.:|||.:::.:||.||||:|::||||.||||:
  Rat   250 KAKSTELQISSVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLL 313

  Fly   277 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGE 341
            |.|:|.|.......:..|||:|.::||||..||..|::|..|:|.|:||||||||.|||:....:
  Rat   314 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKD 378

  Fly   342 VERRIVSQLLTLMDGMKK---SSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 403
            :|||||:||||.||.:..   ::.::|:.|||||:|:||||||.||||||:.:||||...|..:|
  Rat   379 MERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERIL 443

  Fly   404 RIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAAL-----------QQIR----------- 446
            :...:.::|.:..:...:|..:.|.|||||.:||.|||:           :|.|
  Rat   444 QTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRVLMRRQEQQRTEPETGGLPSD 508

  Fly   447 -----------------EKMDLIDL--EDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVE 492
                             |...|:.|  :.|.|..|.:..|.:.:.:|..|:::..|||.||..|.
  Rat   509 GEQGRSLGAEPPSETQDELQRLLGLLRDQDPISEEQMQGLCLELNDFIVALSEVQPSAKREGFVT 573

  Fly   493 VPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 557
            |||.||.|:|.||.:::||...:..||.:|::|...|:....|||..|||||||||||||:|||.
  Rat   574 VPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANES 638

  Fly   558 QANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRV 622
            ..|||||||||||.|:.||||..||.:|.:|:::||||:||||:|::...|...   ..||:.||
  Rat   639 GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR---ETGASVRV 700

  Fly   623 INQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKA---NLR 684
            :||:||||||:..::.|||:.|||||||||||||||||||:.:::.||....|.||||.   |..
  Rat   701 VNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGT 765

  Fly   685 KSPLAKEVDLTYIAK--VTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDE 747
            |.||.::|||..||.  ....::||||:.:.:.|...|:||.|..:        :|.....::
  Rat   766 KPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITGQ--------KNGIGTAEL-- 820

  Fly   748 DDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 787
                 .::..|||||.:..:.|:|..|.|.||...::|.|
  Rat   821 -----TVSHKHFEEAFRKVKPSISVKDQRMYEALQRSLSQ 855

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.