DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and Vcp

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_033529.3 Gene:Vcp / 269523 MGIID:99919 Length:806 Species:Mus musculus


Alignment Length:800 Identity:664/800 - (83%)
Similarity:736/800 - (92%) Gaps:6/800 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KREDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVL 94
            |.:||:|||||:|:|||||||:||.|:|||||||||.|||||||||||||:||||:|:|.|||||
Mouse     8 KGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVL 72

  Fly    95 SDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKP 159
            |||||.||||||||||||||.|.|.||:|:|.|||||||||:.:||||::.||:||||||:||||
Mouse    73 SDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137

  Fly   160 YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVG 224
            |||||||||..||.|:||..||.:|||||.|||.|||||||:|||.|:|:|||||:||||||.||
Mouse   138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202

  Fly   225 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFF 289
            |||||||||||||||||||||||||:||||||||||||||:||||||||||||||||||||||||
Mouse   203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFF 267

  Fly   290 LINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLM 354
            |||||||||||||||||||||||||||||:||||||||:|||||||:||||||||||||||||||
Mouse   268 LINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332

  Fly   355 DGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLE 419
            ||:|:.:|:|||||||||||||||||||||||||:||||||||||||:|:||||||||.||||||
Mouse   333 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLE 397

  Fly   420 QIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPS 484
            |:|.|:|||||||||:||||||||.||:|||||||||:.|||||:.||||||::||:|:::|:||
Mouse   398 QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 462

  Fly   485 ALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 549
            ||||||||||..||.||||||.||:|||||||||||||||||||||.||:|||||||||||||||
Mouse   463 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527

  Fly   550 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGD 614
            ||||||||||||||:||||||||||||||||||:||||||.|||||||||||||||||||||:||
Mouse   528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 592

  Fly   615 AGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAIL 679
            .||||||||||||||||||..||||||||||||||||||||||||||||||||||||:|||.|||
Mouse   593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAIL 657

  Fly   680 KANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMD 744
            ||||||||:||:|||.::||:|.||||||||||||||||||||::||:|||||:||..|. |||:
Mouse   658 KANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNP-SAME 721

  Fly   745 MDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP----GQTGNTS 805
            ::||||||||...||||||:|||||||||||||||||||||||||||| :||||    |..|.:.
Mouse   722 VEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQ 785

  Fly   806 GSGNNLPVNSPGDNGDDDLY 825
            |||.....:...::.|||||
Mouse   786 GSGGGTGGSVYTEDNDDDLY 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 631/739 (85%)
CDC48_N 47..129 CDD:280513 66/81 (81%)
CDC48_2 153..213 CDD:215011 44/59 (75%)
AAA 263..392 CDD:278434 118/128 (92%)
AAA 536..669 CDD:278434 125/132 (95%)
Vps4_C <741..783 CDD:286426 34/41 (83%)
VcpNP_033529.3 CDC48 25..764 CDD:273521 631/739 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 708..727 11/19 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..806 15/38 (39%)
Interaction with UBXN6. /evidence=ECO:0000250 797..806 4/8 (50%)
PIM motif. /evidence=ECO:0000250|UniProtKB:P55072 802..806 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850195
Domainoid 1 1.000 263 1.000 Domainoid score I1921
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5168
Inparanoid 1 1.050 1334 1.000 Inparanoid score I145
Isobase 1 0.950 - 0 Normalized mean entropy S74
OMA 1 1.010 - - QHG60945
OrthoDB 1 1.010 - - D169540at33208
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 1 1.000 - - oto94426
orthoMCL 1 0.900 - - OOG6_100525
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R182
SonicParanoid 1 1.000 - - X1760
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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