DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and SPBC56F2.07c

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_596710.1 Gene:SPBC56F2.07c / 2540537 PomBaseID:SPBC56F2.07c Length:809 Species:Schizosaccharomyces pombe


Alignment Length:679 Identity:280/679 - (41%)
Similarity:423/679 - (62%) Gaps:58/679 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLK--PYFLEAYRPIHMGDNFIVR---A 178
            ::|.|.||.|.|...:......:||.:.| :..:.||:::  ...:||...:.:.:..|.:   |
pombe   173 TEVGSSQSSPSVNESEPKATEDLDELSPG-SYKVKEIHIRSPSNLIEAISDMSLDEPRIYKFTAA 236

  Fly   179 AMRPIEFKVVLTDP------EPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQ 237
            :...||...:|..|      ..|...:.||..| ||.|          :||.:..|||.:.|:||
pombe   237 SSMEIETPDLLKLPHEDRTQSAYNQGSEETQNF-DGPP----------SAVTFSSIGGLQAQIAQ 290

  Fly   238 IKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 302
            |:::||||.::|.|||...:.||||:|:|||||||||::.||||.|..|..|.|:||.::.|..|
pombe   291 IRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLG 355

  Fly   303 ESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMA 367
            |:||.|||.||:|..:.|:|||||||||:||||.:...|.|.|.|:.||||:|||..:..::|:|
pombe   356 ETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIA 420

  Fly   368 ATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLH-DDVDLEQIAAESHGHVGA 431
            |||||||||.||||.||.::||:|||||.:.||:::::....:... :|..||.:|:.:|.:|||
pombe   421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGA 485

  Fly   432 DLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNT 496
            |||::..||||:.|:.   .|.|:.|....::..  ||.|::..:|::....||:||.::|.||.
pombe   486 DLAAVVREAALRAIKR---TISLQKDTSGLDIFG--AVQMDDLEFALSSVRQSAMREFMMESPNV 545

  Fly   497 TWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 561
            .|:||||.|.||::|:|.|::|:.|.:.|.:.|::|.:|||.||||||.||:.|||||.|...||
pombe   546 HWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNF 610

  Fly   562 ISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQI 626
            |:||||||...:.||||..||.:|.|||.|:|.|:||||:|::...||.:     .::|||:..:
pombe   611 IAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGED-----NSSDRVVAAL 670

  Fly   627 LTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKE 691
            |.|:||:.|.:||.::.||||||:||||::||||||:|:|:..|:.::|:.|:|....|...|::
pombe   671 LNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAED 735

  Fly   692 VDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITS 756
            |||..||:.|:|.|||::..:||.|..:|:.:.:||:                        ||..
pombe   736 VDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAK------------------------EICQ 776

  Fly   757 AHFEEAMKFARRSVSDNDIRKYEMFAQTL 785
            |||:.|:...|::::.:.:..|..|::::
pombe   777 AHFKTALLALRKAITRDMLEYYASFSESV 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 280/679 (41%)
CDC48_N 47..129 CDD:280513 4/9 (44%)
CDC48_2 153..213 CDD:215011 17/70 (24%)
AAA 263..392 CDD:278434 75/128 (59%)
AAA 536..669 CDD:278434 73/132 (55%)
Vps4_C <741..783 CDD:286426 9/41 (22%)
SPBC56F2.07cNP_596710.1 SpoVK 296..796 CDD:223540 242/533 (45%)
AAA 316..445 CDD:278434 75/128 (59%)
AAA 585..712 CDD:278434 73/131 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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