DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and SPBC16E9.10c

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_595792.1 Gene:SPBC16E9.10c / 2539968 PomBaseID:SPBC16E9.10c Length:779 Species:Schizosaccharomyces pombe


Alignment Length:619 Identity:256/619 - (41%)
Similarity:379/619 - (61%) Gaps:57/619 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 KREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLI 276
            |.|...|..:.:...||||....:.::.|:|.:|::||.:::..|:.||||:|::||||.|||::
pombe   160 KAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTML 224

  Fly   277 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGE 341
            |.|:|||.|..|..|:.|.|:|.::||||..:|:.||||:..:|.::|||||||:.|||:....|
pombe   225 ANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQRE 289

  Fly   342 VERRIVSQLLTLMDGMK----KSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEV 402
            :|||||:|.||.||.:.    ....::|:.|||||:|:|.||||.|||||||.:.:|....|.::
pombe   290 MERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKI 354

  Fly   403 LRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIR---------EKMDL------- 451
            ||...|.:||..|.|..|:|.::.|:|||||.:|.:.|.:..|:         .|:||       
pombe   355 LRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFN 419

  Fly   452 -------IDLED------------------DKIDAEVLASLAVTMENFRYAMTKSSPSALRETVV 491
                   :|..|                  |.:..|.|..||:..::|..|:.|..||:.||...
pombe   420 ELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFA 484

  Fly   492 EVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 556
            .||..:|.:||.|:|::.|||..:..|::.|:.:...|:....|||.:|||||||||||||:|||
pombe   485 TVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANE 549

  Fly   557 CQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADR 621
            .:|||||::|||||..:.||||..||.:|.:||:::|||:||||||::...|..::.:   |:.|
pombe   550 SKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSE---ASSR 611

  Fly   622 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKS 686
            |:|.:|||:||:..:..|::|.|||||||||||:|||||||:.:.:.|||...|..|||...:::
pombe   612 VVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQT 676

  Fly   687 PLAKEVDLTYIAKVTQ--GFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDD 749
            ||.:||:|..:.:..:  .||||||..:.:.|...|:|.|:.|:| ...|....|:||:     :
pombe   677 PLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADI-ASNEPEITQHSAL-----E 735

  Fly   750 PVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQ 783
            |: .:|:|.||.|.|..:.||||.|.:||:..|:
pombe   736 PI-RVTNADFELAFKNIKPSVSDRDRQKYQRLAK 768

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 256/619 (41%)
CDC48_N 47..129 CDD:280513