Protein Alignment TER94 and Afg2b

DIOPT Version :10

• Sequence 1: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001028428.2
• Gene: Afg2b / 214616
• MGIID: 3036261
• Length: 747
• Species: Mus musculus
• Alignment Length: 731
• Identity: 243/731 - (33%)
• Similarity: 387/731 - (52%)
• Gaps: 96/731 - (13%)

  Fly    85 RRKETVCIVLSDDTC--PDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEG 147
            ||......|..|..|  |..::...|:.        .|.:....||.:   :|:.:.|:.....|
Mouse    64 RRDRVDGFVQLDPQCASPGARVATGRIG--------MDCLQPVPCPPL---RRLEVWPVLRPQAG 117

  Fly   148 VTGN--LFEIYLKPYFLEAYRPIHMGDNFIVRAAM-RPIEFKVVL---TDPEPYCIVAPETVIFC 206
            ...:  :.|:.   :.|...||:..|........: .|:....|:   .||||...|.|.|.|..
Mouse   118 APSSAAVLEVV---HELLRNRPVSRGHVVTTPPGVPGPVAALHVMGGTPDPEPGGWVTPHTRITL 179

  Fly   207 DGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 271
            ...|..:.|..      |...:||..:....::|::.||||:|....|:|:..|||:|:.||||.
Mouse   180 SDKPPPQVEPP------GEVTLGGLSETADSLRELLRLPLRYPLALAALGLAVPRGVLLAGPPGV 238

  Fly   272 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK---NSPAIIFIDEIDAIAP 333
            |||.:.||||.||||....::.|.:.....||:|.|:|:.|:.|::   ..|:::|:||:||:.|
Mouse   239 GKTQLVRAVARETGAELLAVSAPALQGSRPGETEENVRRIFQRAQELASRGPSLLFLDEVDALCP 303

  Fly   334 KRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 398
            :|...|...|.|:|:|:|||:||:.:....:|:.|||||:.:||||||.||||||:.||.|....
Mouse   304 RRGGPHRAPESRVVAQVLTLLDGIHRDREFVVVGATNRPDELDPALRRPGRFDREVVIGTPTLKQ 368

  Fly   399 RLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQI--REKMDLIDLEDDKIDA 461
            |..:|::.|..|.:...:||..:|..:.|:|||||.:||.|||:..:  .||    :.:..||:.
Mouse   369 REAILQVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAAMCALLKNEK----NQDSPKIEE 429

  Fly   462 EVLASLAVTMENFRYAMTKSSPSALRET--VVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDK 524
                      .:|..|..|..||:.|.:  ::::....|..|||||.||.:|::.|::|::.|.:
Mouse   430 ----------TDFLEAFKKIQPSSFRSSTGLMDIKPVGWEQIGGLEDVKLKLKQCVEWPLKFPQE 484

  Fly   525 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 589
            |.:.|:...:|:|.||||||.||.|.:|:|..|..:|:||.|.:|.:.:.|:||..:..:|.:||
Mouse   485 FARMGLTQPKGLLLYGPPGCAKTTLVRALATGCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQAR 549

  Fly   590 SAAPCVLFFDELDSIAKARGGNVGDAG-GAADRVINQILTEMDGMGAK----------------- 636
            :..|.::|.||:||:..:|  :||.:| .|.:||::.:|.|:||:|.:
Mouse   550 ANTPALVFLDEIDSVLGSR--SVGTSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQECQEI 612

  Fly   637 --KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAK 699
              ::|.|:.||||||::|.|:|||||||::||:|.||.:.|.:|||......|:..:|.|..:|.
Mouse   613 LSRSVMIVVATNRPDVLDDALLRPGRLDKIIYVPPPDQEGRLSILKVCTNNMPVGPDVSLENLAA 677

  Fly   700 VTQGFSGADLTEICQRACKLAIRQ-AIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAM 763
            .|..||||||..:|:.|...|::: .:||...|::                        ||.||:
Mouse   678 ETCFFSGADLRNLCKEAALFALQENGLEATTVRQE------------------------HFTEAL 718

  Fly   764 KFARRSVSDNDIRKYE 779
            |..:.|::..::..||
Mouse   719 KTVKPSLTLKELTFYE 734

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	243/731 (33%)
Afg2b	NP_001028428.2	CDC48	14..738	CDD:273521	243/731 (33%)