DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and ZK938.3

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001364588.1 Gene:ZK938.3 / 191468 WormBaseID:WBGene00014160 Length:616 Species:Caenorhabditis elegans


Alignment Length:386 Identity:77/386 - (19%)
Similarity:145/386 - (37%) Gaps:86/386 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 IMSKLAGESESNLRKAF-----EEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMD 355
            |:.||..:.::..|:.:     |.|.:.....:.||...|....:.:|.|...|::|.::     
 Worm   216 IIQKLERKYQAISRRNYVRFVRERAAELHGLKVEIDATQAAIRIQARTRGYFARKLVREM----- 275

  Fly   356 GMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQ 420
               :...|.::..|  |.|.  ..:|....:|:...|:....|..|:               :||
 Worm   276 ---REKELNILNMT--PESY--IRKRCAERERKRKEGLAGGVGGGEI---------------IEQ 318

  Fly   421 IAAESHGHVGADLASLCSEAALQQIREKM-----DLIDLEDDKIDAEVLASLAVTMEN----FRY 476
            |.     ....|||.     ||:.::...     ||.|::.        ::|.:.:.|    ||.
 Worm   319 IE-----EFNTDLAE-----ALKLLKTHFFFPTSDLTDIKP--------SALPIDLNNQETIFRD 365

  Fly   477 AMTKSSPSALRETVVEVPN-TTWTDIGGLES--VKKELQELVQYPVEHPDKFLKFGMQPSRG--- 535
            |..:...|.|.:  :|:.. |:..:|..:|:  .|.:.:..:...|..|.....:..|.|:.   
 Worm   366 ACFRGIVSPLAQ--IELSELTSQREICKIENRQFKFDFRSFLVQTVCTPCSLGTWQKQKSKDQKM 428

  Fly   536 --VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDK-ARSAAPCVLF 597
              :|..|.|..|||..|:||:..|....:.: ...::.|    .:..:..:..| |:.....::.
 Worm   429 QWLLLSGAPDSGKTTWARAISRACHVTHVHI-SKNVVNM----GKRKIYTVVKKLAKQEKRLLVS 488

  Fly   598 FDELDSIAKARGGNVGDAGGAADR--VINQILTEMDGMGAKKNVFIIGATNRP-DIIDPAI 655
            .|.:|.:.|.....     |...|  ::...|:::..:   |.|.:||.|..| |.:|..|
 Worm   489 IDRIDVMKKDPKHK-----GYTHRQILLRNFLSDLSNI---KFVMVIGMTRVPLDDLDSYI 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 77/386 (20%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434 19/100 (19%)
AAA 536..669 CDD:278434 28/124 (23%)
Vps4_C <741..783 CDD:286426
ZK938.3NP_001364588.1 P-loop_NTPase 431..545 CDD:422963 28/124 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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