DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and prx-1

DIOPT Version :10

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_510386.2 Gene:prx-1 / 181538 WormBaseID:WBGene00004191 Length:996 Species:Caenorhabditis elegans


Alignment Length:798 Identity:211/798 - (26%)
Similarity:345/798 - (43%) Gaps:175/798 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHL 118
            :|..|.:.:......:.|||            .....|:..::...|...|::..|.:|.:|   
 Worm   291 RNQSNELDASLSHMFESLQL------------ENRCHCVEGTNTLEPYMNIKIFGVTQNRIC--- 340

  Fly   119 SDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLF-EIYLKPYFLEAYRPIHMGDNFIVRAAMRP 182
                :::.|..:...:..:.:...|.|..:|.:|. |:...|..|..     .|....|....:.
 Worm   341 ----TLRYCEIMMEKETFQWVKEFELTNVLTKSLHSELQGNPILLSV-----EGKELDVAVDDKA 396

  Fly   183 IEFKVV---------LTDPEPYCIVAPETVIFCD--------GDP------IKREEEEESLNAV- 223
            |..|||         :|:...:.......:||..        ||.      .||.||.|:...: 
 Worm   397 IRLKVVPSMKGLVKRVTENTCFLFDLTTELIFQQLGDLKQKHGDTENTRRRRKRTEEAEASEQIP 461

  Fly   224 ------GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAI-----GVKPPRGILMYGPPGTGKTL-- 275
                  ..::.|     .||.|..|::. .|..|...:     |.|  :.:::.|..|:|||.  
 Worm   462 QKPETSTMENFG-----FAQNKHFVQIG-SHSKLLSELDKVCCGGK--QHVMVLGGNGSGKTTFI 518

  Fly   276 --IARAVANETGAFF------FLING--PEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDA 330
              :||.:::.:...|      .|:.|  .:|:.||       |.....|.|...|:.:|:|:.|.
 Worm   519 KKLARRLSHNSSVTFCKMVPCALLKGRSADIIEKL-------LSDTLHEMEVKKPSCLFLDDFDV 576

  Fly   331 IAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNS-----IDPALRRFGRFDREID 390
            |.|:.|:   |.....:.:::::.....:::.:.|:....|.:|     ::..:|......|:|:
 Worm   577 ILPQIDQ---EQRHLAMEKVVSVFAQKLRTTEVSVVLVAQRLSSLNDGFVEQVMRARPIVSRKIE 638

  Fly   391 IGIPDATGRLEVLRIHTKNMKLHDDVD-LEQIAAESHGHVGADLASL-------CSEAALQQIRE 447
            :.......|.|:....   :.|.::.| :.:|..:|.|:..:::..|       |:...::.|.|
 Worm   639 LEQLTKEDRCEIFETF---LDLPENSDIISEIVKKSDGYTFSEIEKLAVSINVECAIKGVKYITE 700

  Fly   448 -------------KMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWT 499
                         ||..|:      |.:||.    |||                           
 Worm   701 IEVEKAFECFVAGKMGKIE------DGQVLP----TME--------------------------- 728

  Fly   500 DIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 564
            |:||:...||.|::::.:|.::|..|...|:..|:|:|.:||.||||||||.|..:....:.::|
 Worm   729 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNV 793

  Fly   565 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTE 629
            ||||||:.:.|.||.|||.:|:||||.|||:||||||||:|..||   .|:.|..|||:||:|||
 Worm   794 KGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRG---HDSTGVTDRVVNQLLTE 855

  Fly   630 MDGM-GAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRK-SPLAKEV 692
            :||. |..|.|.|:|.|:|.|:||.|:|||||.|..:|...|:...|..|:|....| .|  .:|
 Worm   856 LDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKP--TDV 918

  Fly   693 DLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSA 757
            |...:|:.|.|:|||||..:...|.....||     |.:|::..|..|..:|....:.|      
 Worm   919 DFECLAQKTDGWSGADLQLLFTNAQFYNARQ-----IAKEEDGLEEDNVPIDQASIESV------ 972

  Fly   758 HFEEAMKFARRSVSDNDI 775
             |.:::...:||..||.|
 Worm   973 -FNDSIPKPKRSQVDNRI 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 211/798 (26%)
prx-1NP_510386.2 PEX-1N 103..179 CDD:462729
P-loop containing Nucleoside Triphosphate Hydrolases 481..>522 CDD:476819 10/43 (23%)
CDC48 <504..952 CDD:273521 156/507 (31%)
RecA-like_PEX1_r2 736..894 CDD:410934 82/160 (51%)
Blue background indicates that the domain is not in the aligned region.

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