DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TER94 and figl-1

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_504197.1 Gene:figl-1 / 178829 WormBaseID:WBGene00017981 Length:594 Species:Caenorhabditis elegans


Alignment Length:554 Identity:153/554 - (27%)
Similarity:247/554 - (44%) Gaps:127/554 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEQDEKMKPKDSFDKREDLATAILKRKDRPNRLIVEEAQNDDNSV-VSLSQAKMDELQL------ 73
            |:..::..|..|..::..|       .|..:.:|::|  ::|.:| ||.|| |.|..:|      
 Worm    57 SDSAQQQPPFKSRSQQNGL-------DDELDGIIIDE--DEDRTVDVSFSQ-KQDTRKLKSRPFL 111

  Fly    74 -----FR-GDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKY 132
                 |: |:....|.::|:|....:...|...|:|:..   :|:.:|    |:|      |...
 Worm   112 GEKSSFKLGEIPKPKEEKRREEPFTMRGFDFGSDDKVTK---IRDKIC----DIV------DPTN 163

  Fly   133 GKRVR---ILPIDEST-EGVTGNLFEIYLKPYFLEAYRPIH-----------MGDNFIVRAAMRP 182
            .:|..   |..:.|:| :|:     |:...|:|.:...|..           :..:|...|...|
 Worm   164 ARRTDPNFIRQMHENTLKGI-----EVASNPHFKKTRAPTKNRAAIQNTLGTLYPSFTTAAGQDP 223

  Fly   183 --IEFKVVLTDPE-----------PYCIVAPETVIFCDGDPIKR--------------------- 213
              .:|:|.|....           |....||:....|....|::                     
 Worm   224 QNSKFQVPLDRQSSSQSIGSLAGIPPARRAPDIPKRCSNPLIRKAMGMDTEGGGKDEKMSGLRAE 288

  Fly   214 --------------EEEEESL-NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGI 263
                          |.|..|: |.:|:.|:.|.......::|:|.||.:.|.:|..|.. ||:|:
 Worm   289 PTLKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIRA-PPKGV 352

  Fly   264 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEI 328
            |::||||||||:|.|.||::..|.||.|:...:.||..||.|..:|..|..|....|::||||||
 Worm   353 LLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEI 417

  Fly   329 DAIAPKRDKTHGEVERRIVSQLLTLMDGMKKS--SHLIVMAATNRPNSIDPALRRFGRFDREIDI 391
            |::...|.::..|..|||.::.|..:||:..:  ..|:|:.|||||..:|.|.||  ||.:.:.|
 Worm   418 DSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYI 480

  Fly   392 GIPDATGRLEV---LRIHTKNMKLHD--DVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDL 451
            .:|:...|.::   |.:.|:    ||  :.:||:|...:.|:.|||:..||:|||:..||:..| 
 Worm   481 ALPEPESRTQIVQNLLVGTR----HDITNHNLERIRELTDGYSGADMRQLCTEAAMGPIRDIGD- 540

  Fly   452 IDLED-DKIDAEVLASLAVTMENFRYAMTKSSPS 484
             |:|. ||.|..     |||:.:|..|.....|:
 Worm   541 -DIETIDKDDIR-----AVTVMDFAEAARVVRPT 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 148/523 (28%)
CDC48_N 47..129 CDD:280513 23/94 (24%)
CDC48_2 153..213 CDD:215011 15/83 (18%)
AAA 263..392 CDD:278434 54/130 (42%)
AAA 536..669 CDD:278434
Vps4_C <741..783 CDD:286426
figl-1NP_504197.1 P-loop_NTPase 315..>371 CDD:304359 24/56 (43%)
AAA 348..484 CDD:214640 58/137 (42%)
AAA 352..480 CDD:278434 54/129 (42%)
Vps4_C <545..585 CDD:286426 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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