DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and pex6

DIOPT Version :10

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_031758131.1 Gene:pex6 / 100491422 XenbaseID:XB-GENE-6049481 Length:896 Species:Xenopus tropicalis


Alignment Length:727 Identity:224/727 - (30%)
Similarity:363/727 - (49%) Gaps:114/727 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LSDVVSVQSCPDVKYGKR-------------VRIL--PIDESTEGVTGNLFEIYLKPYFLEAYRP 167
            ||:::..:.|.|...|..             |:|:  |..:|.......||.     :||.| |.
 Frog   201 LSEILIQRFCSDTLEGGSSALVGPPLAKQLCVQIVASPSYDSDAPYRQALFH-----HFLTA-RV 259

  Fly   168 IHMGD--------------NFIVRAAMRP-IEFKVVLTDPEP-------YCIVAPETVIFCDGDP 210
            |..||              |...||...| :.|||:..|..|       |...:...::|.:|..
 Frog   260 IQRGDILCLSSLSHGEFLQNNPRRAGRCPDLYFKVLGIDGRPGEEQRPAYLAHSNHMILFQEGST 324

  Fly   211 I-------KREEEE--ESLNAVG----YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 262
            :       .|:...  .||...|    .|:|  ||             :..|.|..:..|.|..|
 Frog   325 LSYVPSFPSRDGHVFWSSLFPAGLSHAVDEI--CR-------------ILQPYLEVSREVLPTGG 374

  Fly   263 -ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFID 326
             :|..|.|.:||..:.:|..:......:.|....:..:.:..:.:.|:.:.....:.:|.::.:.
 Frog   375 RVLFSGSPSSGKKTVVKAACSRLNLHLYQIECARLCREGSAGNVARLKASLSRVPEFAPCLVLLS 439

  Fly   327 EIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSH---LIVMAATNRPNSIDPALRRFGRFDRE 388
            :::.:..:||.:  ..:.|::|...:|:.|.:..:.   ::|:|.|:.|..|...::..  |..|
 Frog   440 QVELLGRERDGS--REDGRVISAFRSLLLGGETQARDLPVLVVATTSSPKEIPLDIQTC--FLNE 500

  Fly   389 IDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAAL---QQIREKMD 450
            :.:..|....||.:|...|..:.|..||.:.::|..:.|.|..|..||.|.|.|   .:||....
 Frog   501 VSLEPPTEEQRLSLLAALTAPLPLGRDVSITKLARTTAGFVLGDFCSLVSRAGLSASNRIRSSRP 565

  Fly   451 LIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVE------VPNTTWTDIGGLESVKK 509
            :.:.|.   :..:.|.:|:..::|:.|:     |||:::..|      ||...|.|:|||..||:
 Frog   566 VTEEEG---EGPLAAGVALGAQDFQEAL-----SALQDSQAEAVGAPKVPCVQWRDVGGLHDVKR 622

  Fly   510 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 574
            :|.:.||.|:|||: .|..|::.| |||.|||||.||||||||:|.||...|:|||||||:.|:.
 Frog   623 QLLDTVQLPLEHPE-VLSMGLRRS-GVLLYGPPGTGKTLLAKAVATECAMTFLSVKGPELINMYV 685

  Fly   575 GESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNV 639
            |:||.|||.:|.:|||||||::|||||||:|.:||.: ||:||..|||::|:|.|:||:.:..:|
 Frog   686 GQSEENVRKVFSRARSAAPCIIFFDELDSLAPSRGRS-GDSGGVMDRVVSQLLAELDGLNSSSDV 749

  Fly   640 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDK-SREAILKANLRKSPLAKEVDLT-YIAKVTQ 702
            |:||||||||::|.|:|||||.|:|:|:.:.::: |:..:|.|..||..|...|||: .|.:..:
 Frog   750 FVIGATNRPDLLDSALLRPGRFDKLLYVGVNEERDSQLRVLAAITRKFSLDPSVDLSAVIERCPR 814

  Fly   703 GFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFAR 767
            ..:||||..:|..|...|:::.::     :.|....|.:        |.|.:...||.:|....:
 Frog   815 AVTGADLYSLCADAMMGAVKERVQ-----QLEDGHQQQT--------PEPLVKMEHFLQAANRLQ 866

  Fly   768 RSVSDNDIRKYE 779
            .||..:::::||
 Frog   867 PSVCVSELQRYE 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 224/727 (31%)
pex6XP_031758131.1 CDC48 <371..884 CDD:273521 183/536 (34%)

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