DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and fign

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_004917757.1 Gene:fign / 100488151 XenbaseID:XB-GENE-1011106 Length:783 Species:Xenopus tropicalis


Alignment Length:589 Identity:135/589 - (22%)
Similarity:223/589 - (37%) Gaps:152/589 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 PSLFKAIGVK-----PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNL 308
            ||.:...|:.     ||..:..|.....|.|.||.:|.:...|                  .|..
 Frog   299 PSAYLPSGIPAPTPLPPTTVPGYSYQSHGLTPIAPSVVSNNSA------------------SSLK 345

  Fly   309 RKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSH--LIVMAATNR 371
            ||||..|.:                      |::|    |.......|.::|||  :..|..::.
 Frog   346 RKAFYMAGQ----------------------GDIE----SSYGNYSYGQQRSSHSPMYRMPDSSI 384

  Fly   372 PNSIDPALRRFGRFDREIDIG----------IPDATGRL---EVLRI-------HTKNMK----- 411
            .||     .|...|||..:.|          :|....|.   :..|.       .|||.:     
 Frog   385 TNS-----NRGNGFDRSAETGSLAFKPTKQLVPSDQQRKFNNQSTRALTPPSYSSTKNSRSSDSF 444

  Fly   412 -------LHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE-KMDLIDLEDDKIDAEVLASLA 468
                   |::..|..::...:....|...|:..:.:...|::. ...||||..::|         
 Frog   445 GKYNSSALNEHSDEHRLIPHTMQGPGLHTATSSNHSVDDQLKNTDSHLIDLVTNEI--------- 500

  Fly   469 VTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPS 533
                     :.:..|            ..|.:|.||:.||..::|.|.:||...|.|......| 
 Frog   501 ---------INQGHP------------VDWDEIAGLDLVKAFIKEEVLWPVIRSDAFSGLTALP- 543

  Fly   534 RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFF 598
            |.:|.:||.|.|||||.:.||::..|.|..:....|:|.|..|.|..|...|..||...|.|:|.
 Frog   544 RSILLFGPRGTGKTLLGRCIASQLGATFFKISASNLVTKWITEGEKIVHASFLVARCRQPSVIFV 608

  Fly   599 DELDSIAKARGGNVGDAGGAADRVINQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRPGRL 661
            .::|.:..::   |.:......|:..:.|.::|.:  .|:..:.:|.||::|:.||.::.|  ..
 Frog   609 SDIDMLLSSQ---VNEEHSPISRMRTEFLMQLDTVLSSAEDQIVVICATSKPEQIDESLRR--YF 668

  Fly   662 DQLIYIPLPDDKSREAILKANLRKSPLA---KEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 723
            .:.:.|||||..:|..|:...|.:....   |||.|  :.:.|:||||.|:..:||.|....:..
 Frog   669 MKRLLIPLPDSTARHQIIIQLLSQHNYCLNDKEVAL--LVQRTEGFSGLDVARLCQEAVVGPLHA 731

  Fly   724 AIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQS 788
            ...:::           ||:..::..||   |...||......:.|:|..::..|      ::.:
 Frog   732 IPPSDL-----------SAIMPNQLRPV---TYQDFENVFCKIQPSISQKELDTY------IEWN 776

  Fly   789 RGFG 792
            :.||
 Frog   777 KMFG 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 133/582 (23%)
CDC48_N 47..129 CDD:280513
CDC48_2 153..213 CDD:215011
AAA 263..392 CDD:278434 27/130 (21%)
AAA 536..669 CDD:278434 39/134 (29%)
Vps4_C <741..783 CDD:286426 10/41 (24%)
fignXP_004917757.1 SpoVK <507..770 CDD:223540 82/284 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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