DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and Hoxd9

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001166940.1 Gene:Hoxd9 / 688999 RGDID:1582908 Length:343 Species:Rattus norvegicus


Alignment Length:91 Identity:37/91 - (40%)
Similarity:48/91 - (52%) Gaps:15/91 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PPSPNECLSSPDNSLNGSRGSEIPA-----DPSVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRC 101
            ||.|.:....|:|          ||     ..|.|:.|..:|:.|...|||||....|::|.||.
  Rat   253 PPQPPQQQLDPNN----------PAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRY 307

  Fly   102 ELAAQLNLPESTIKVWFQNRRMKDKR 127
            |:|..|||.|..:|:||||||||.|:
  Rat   308 EVARILNLTERQVKIWFQNRRMKMKK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 28/55 (51%)
Hoxd9NP_001166940.1 Hox9_act 1..>155 CDD:461369
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..196
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..267 5/23 (22%)
Homeodomain 277..328 CDD:459649 24/50 (48%)
Blue background indicates that the domain is not in the aligned region.

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