Protein Alignment eve and Cdx2

DIOPT Version :10

• Sequence 1: NP_523670.2
• Gene: eve / 36039
• FlyBaseID: FBgn0000606
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_076453.1
• Gene: Cdx2 / 66019
• RGDID: 621234
• Length: 310
• Species: Rattus norvegicus
• Alignment Length: 180
• Identity: 55/180 - (30%)
• Similarity: 75/180 - (41%)
• Gaps: 30/180 - (16%)

  Fly     4 YRTYNMESHHAHHDASPVDQKPLVVDLLATQYGKPQTPPPSPNECLSSPDNSLNGSRGS-----E 63
            |..::...||.||   |.........||.|.    ...||.|....::...|.:|.|.:     .
  Rat   112 YHAHHHPHHHPHH---PAAAPSCASGLLQTL----NPGPPGPAATAAAEQLSPSGQRRNLCEWMR 169

  Fly    64 IPADPSV---------RRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQ 119
            .||.||:         .:||..:|..|...|||||:...|::..|:.||||.|.|.|..:|:|||
  Rat   170 KPAQPSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQ 234

  Fly   120 NRRMKDKR------QRIAVAWPYAAVYSDPAFAASILQAAANSVGMPYPP 163
            |||.|:::      |:.....|.|.....|:...|   .|..||..|..|
  Rat   235 NRRAKERKINKKKLQQQQQQQPPAPPPPQPSQPQS---GALRSVPEPLSP 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eve	NP_523670.2	Homeodomain	71..127	CDD:459649	26/55 (47%)
Cdx2	NP_076453.1	Caudal_act	13..178	CDD:461413	19/72 (26%)
		Homeodomain	187..242	CDD:459649	26/54 (48%)