DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and hoxd1

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001016678.1 Gene:hoxd1 / 549432 XenbaseID:XB-GENE-482731 Length:301 Species:Xenopus tropicalis


Alignment Length:143 Identity:45/143 - (31%)
Similarity:63/143 - (44%) Gaps:36/143 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YGKPQTPPPSPNECL--------SSPDNSLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFYK 91
            |.||.:|....:...        :.|..||....|  :.:.|..  .||.||..||..|||||:.
 Frog   164 YPKPASPASDTHVSTFDWMKVKRNPPKKSLQSEYG--VASPPCT--VRTNFTTKQLTELEKEFHF 224

  Fly    92 ENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAANS 156
            ..|::|.||.|:|..|.|.::.:|:||||||||.|::....:.|                   ||
 Frog   225 NKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGSLP-------------------NS 270

  Fly   157 VGMPYPPYAPAAA 169
                 ||..||::
 Frog   271 -----PPSGPASS 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 28/55 (51%)
hoxd1NP_001016678.1 Antp-type hexapeptide. /evidence=ECO:0000255 178..183 0/4 (0%)
Homeodomain 207..260 CDD:459649 28/52 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..301 11/48 (23%)

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