DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and Hoxa13

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001258284.1 Gene:Hoxa13 / 500129 RGDID:1562483 Length:386 Species:Rattus norvegicus


Alignment Length:96 Identity:30/96 - (31%)
Similarity:53/96 - (55%) Gaps:14/96 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPQTPPP-----SPNECLSSPDNSLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFYKENYVS 96
            |.||.||     :..:.:|.|.::.:..||         |:.|..:|:.||..||:|:....:::
  Rat   291 KEQTQPPHLWKSTLPDVVSHPSDASSYRRG---------RKKRVPYTKVQLKELEREYATNKFIT 346

  Fly    97 RPRRCELAAQLNLPESTIKVWFQNRRMKDKR 127
            :.:|..::|..||.|..:.:||||||:|:|:
  Rat   347 KDKRRRISATTNLSERQVTIWFQNRRVKEKK 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 20/55 (36%)
Hoxa13NP_001258284.1 HoxA13_N <151..222 CDD:463521
Homeodomain 321..377 CDD:459649 20/55 (36%)
Blue background indicates that the domain is not in the aligned region.

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