DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and cdx1a

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_998001.2 Gene:cdx1a / 405762 ZFINID:ZDB-GENE-050510-1 Length:228 Species:Danio rerio


Alignment Length:73 Identity:29/73 - (39%)
Similarity:44/73 - (60%) Gaps:5/73 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RGSEIPADPSVR-----RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQ 119
            |.|.:|.:|..:     :||..::..|...|||||:...|::..|:.|||..|||.|..:|:|||
Zfish   114 RRSAVPTNPGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQ 178

  Fly   120 NRRMKDKR 127
            |||.|:::
Zfish   179 NRRAKERK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 25/60 (42%)
cdx1aNP_998001.2 Caudal_act 11..123 CDD:461413 3/8 (38%)
Homeodomain 131..186 CDD:459649 25/54 (46%)

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