DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eve and gsb-n

DIOPT Version :9

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:324 Identity:78/324 - (24%)
Similarity:106/324 - (32%) Gaps:111/324 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PPSPNECLSSPDNSLNGS-RGSE---------------------------IPADPSVRRYRTAFT 78
            |||    .||....|.|| ||||                           ||.....||.||.||
  Fly   130 PPS----TSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFT 190

  Fly    79 RDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR-------------- 129
            .:||..||:.|.:..|.....|.|||....|.|:.|:|||.|||.:.::..              
  Fly   191 AEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGS 255

  Fly   130 ----IAVAWPYA--------------AVYSDPAFAASILQAAANSVGMPYPPYAPAAAAAAAAAA 176
                :.|....|              |.|| ||...:...|..|. |:.:..:||::..:||.||
  Fly   256 SNVGVGVGLSGATAPLGYGPLGVGSMAGYS-PAPGTTATGAGMND-GVHHAAHAPSSHHSAATAA 318

  Fly   177 AVATNPMMATGMP----------PMGMPQMPTMQMPGHSGHAGH--------------------- 210
            |.|.:.....|..          |.|..|      |||.|...:                     
  Fly   319 AAAHHHTQMGGYDLVQSAAQHGFPGGFAQ------PGHFGSQNYYHQDYSKLTIDDFSKLTADSV 377

  Fly   211 ----PSPYGQYRYTPYHIPAR--PAPPHPAGPHMHH--PHMMGSSATGSSYSAGAAGLLGALPS 266
                ||.:....|:....|:.  .|..|.|..:..|  .|.:...|..:::...|:.....||:
  Fly   378 SKISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASAYSHPLPT 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeobox 74..126 CDD:278475 23/51 (45%)
gsb-nNP_523862.1 PAX 20..141 CDD:278709 5/14 (36%)
Homeobox 185..238 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450992
Domainoid 1 1.000 49 1.000 Domainoid score I2937
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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