DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eve and nkx2.2a

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_571497.2 Gene:nkx2.2a / 30697 ZFINID:ZDB-GENE-980526-403 Length:273 Species:Danio rerio


Alignment Length:168 Identity:49/168 - (29%)
Similarity:72/168 - (42%) Gaps:29/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QTPPPSPNECLSSPDN----SLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFYKENYVSRPR 99
            ::|.||.:|   ||||    |.|||...:      .|:.|..|::.|...||:.|.::.|:|.|.
Zfish   103 KSPEPSADE---SPDNDKETSSNGSDSGK------KRKRRVLFSKAQTYELERRFRQQRYLSAPE 158

  Fly   100 RCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASIL-------------- 150
            |..||:.:.|..:.:|:||||.|.|.||.|.........:.|....|..:|              
Zfish   159 REHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQD 223

  Fly   151 QAAANSVGMPYPPYAPAAAAAAA--AAAAVATNPMMAT 186
            .||....|:|:..|:..:.....  |..:.||.|...|
Zfish   224 LAATFQAGIPFSAYSAQSLQHMQYNAHYSAATTPQFPT 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 21/55 (38%)
nkx2.2aNP_571497.2 COG5576 93..218 CDD:227863 39/123 (32%)
Homeodomain 130..186 CDD:459649 21/55 (38%)

Return to query results.
Submit another query.