DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and Nkx1-1

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_234082.6 Gene:Nkx1-1 / 298981 RGDID:1564874 Length:443 Species:Rattus norvegicus


Alignment Length:252 Identity:70/252 - (27%)
Similarity:100/252 - (39%) Gaps:59/252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AHHDASPVDQKPLVVDLLATQYGKPQTPP--PSPNECLSSPDNSLNGSRGSEIPADP-------- 68
            |..:|||||:        |...|.....|  |.|....:...|:.:..:|:.:...|        
  Rat   229 AEVEASPVDE--------AAAPGPRGNSPGAPGPPVTAAGAGNAGSTPQGAAVATKPKRKRTGSD 285

  Fly    69 ----SVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR 129
                ..||.|||||.:||..||.:|....|:|...|..||..|:|.|:.:|:||||||.|.|:| 
  Rat   286 SKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ- 349

  Fly   130 IAVAWPYAAVYSDPAFAASILQAAANSVGMPYPPYAPAAAAAAAAAAAVATNPMMATGMPPMGMP 194
                        :|....|   |.....|.|.|...|.|....      ..:|:..:  ||||.|
  Rat   350 ------------NPGADTS---APTGGGGGPGPGAGPGAGLPG------GLSPLSPS--PPMGAP 391

  Fly   195 QMPTMQMPGHSGHAGHPSPYGQYRYTPYHIPARPAPPHPAGPHMHHPHMMGSSATGS 251
                :.:.|.:|:..| ||.|        :......|..:.|.:..|.::||...|:
  Rat   392 ----LALHGPAGYPAH-SPGG--------LVCAAQLPFLSSPAVLSPFVLGSQTYGA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 28/55 (51%)
Nkx1-1XP_234082.6 Homeodomain 292..348 CDD:459649 28/55 (51%)

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