DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eve and Hoxb9

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001093967.1 Gene:Hoxb9 / 287647 RGDID:1306158 Length:250 Species:Rattus norvegicus


Alignment Length:86 Identity:37/86 - (43%)
Similarity:48/86 - (55%) Gaps:11/86 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNSL-NGSRGSEIP--ADPSV--------RRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQ 106
            ||.: .||...|.|  .:||.        |:.|..:|:.|...|||||....|::|.||.|:|..
  Rat   157 DNKICEGSEDKERPDQTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARL 221

  Fly   107 LNLPESTIKVWFQNRRMKDKR 127
            |||.|..:|:||||||||.|:
  Rat   222 LNLSERQVKIWFQNRRMKMKK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 28/55 (51%)
Hoxb9NP_001093967.1 Hox9_act 1..172 CDD:461369 6/14 (43%)
Homeodomain 186..242 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.